Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00918 |
Symbol | |
ID | 6776594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 965148 |
End bp | 965699 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754350 |
Product | protease |
Protein accession | YP_002125226 |
Protein GI | 196155737 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAATA CGCAAAATCT ACAGGGTAAG AAGATAGCCA TTTTAGCAAC AAACGGTTTT GAGCAAAGTG AGCTTGTTGA ACCTAAAACC TTGTTCACCG AGCAAGGCGC TAAGGTAGAC ATTCTTTCCA TTGAGGACCA AACGACGATT AAAGCCTGGG ATGAAGACAA TTGGGGTAAA GAGGTAGATG TCGATTTACA AGTATCGTCA GCTAACCTTG AAGACTACGA TGCCCTTGTA CTACCAGGCG GGCAGATTAA CCCTGATGTG CTTCGAACTA ACAACGATGC GGTAGCCTTT ATCAGCAAAG CCAATGGCAC CGACAGTATT AAAGCTATTG GCGCAATTTG TCACGGCCCA TGGCTATTGG TTGAGTCGGG ACTAGCCGAC GGCGCCACGC TTACATCGTT TCCAAGTATT AAAACCGATT TACAGAATGC AGGGGCGACC TGGGTAGATG AAGAAGTGGT AAATCACGAA AAACTGGTGA CAAGCCGTAA CCCCAACGAT ATCCCCGCAT TTGTTGCCAA AATTAGCGAG TTAGTTGCCT AA
|
Protein sequence | MSNTQNLQGK KIAILATNGF EQSELVEPKT LFTEQGAKVD ILSIEDQTTI KAWDEDNWGK EVDVDLQVSS ANLEDYDALV LPGGQINPDV LRTNNDAVAF ISKANGTDSI KAIGAICHGP WLLVESGLAD GATLTSFPSI KTDLQNAGAT WVDEEVVNHE KLVTSRNPND IPAFVAKISE LVA
|
| |