Gene MADE_00918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00918 
Symbol 
ID6776594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp965148 
End bp965699 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content46% 
IMG OID642754350 
Productprotease 
Protein accessionYP_002125226 
Protein GI196155737 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA CGCAAAATCT ACAGGGTAAG AAGATAGCCA TTTTAGCAAC AAACGGTTTT 
GAGCAAAGTG AGCTTGTTGA ACCTAAAACC TTGTTCACCG AGCAAGGCGC TAAGGTAGAC
ATTCTTTCCA TTGAGGACCA AACGACGATT AAAGCCTGGG ATGAAGACAA TTGGGGTAAA
GAGGTAGATG TCGATTTACA AGTATCGTCA GCTAACCTTG AAGACTACGA TGCCCTTGTA
CTACCAGGCG GGCAGATTAA CCCTGATGTG CTTCGAACTA ACAACGATGC GGTAGCCTTT
ATCAGCAAAG CCAATGGCAC CGACAGTATT AAAGCTATTG GCGCAATTTG TCACGGCCCA
TGGCTATTGG TTGAGTCGGG ACTAGCCGAC GGCGCCACGC TTACATCGTT TCCAAGTATT
AAAACCGATT TACAGAATGC AGGGGCGACC TGGGTAGATG AAGAAGTGGT AAATCACGAA
AAACTGGTGA CAAGCCGTAA CCCCAACGAT ATCCCCGCAT TTGTTGCCAA AATTAGCGAG
TTAGTTGCCT AA
 
Protein sequence
MSNTQNLQGK KIAILATNGF EQSELVEPKT LFTEQGAKVD ILSIEDQTTI KAWDEDNWGK 
EVDVDLQVSS ANLEDYDALV LPGGQINPDV LRTNNDAVAF ISKANGTDSI KAIGAICHGP
WLLVESGLAD GATLTSFPSI KTDLQNAGAT WVDEEVVNHE KLVTSRNPND IPAFVAKISE
LVA