| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00885 |
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| Symbol | |
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| ID | 6778683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 935722 |
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| End bp | 936417 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642754317 |
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| Product | putative branched-chain amino acid transport protein (ABC superfamily, ATP_bind) |
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| Protein accession | YP_002125193 |
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| Protein GI | 196155704 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAC TACAGAATAT TGATCAACAA TATAGCGGTA CTCAAATTCT TTGGGATGCG
AACCTGAAAA TAGAAAAGGG TTCTCGAACT GTAATTATGG GCCGAAATGG TGTTGGCAAA
ACTACGTTGC TAAACGTCAT TATGGGGCTG TTGCCAATAA GCGGTGGCAA GCTCACGATT
AACAATAAAG ATATGTCTAA AGCCTCGGTA GAGTCGCGAC CAGAGATAGG TGTAGGCTAT
GTACCCCAGG GGCGTCATAT TTTTCCTCAG CTAACCGTTG AAGAAAATTT GAAGATAAGT
TTAAACTGCA AAAGGCAAAC TAGTAAGACC ATACCTGAGC ATATATTTGA ACTCTTCCCT
GTGTTAAAGG AAATGTTGCA CAGACGAGGG GGGGACTTGT CGGGCGGACA ACAACAACAG
TTAGCGATAG CTCGAGCGTT GGTGTTAAAC CCTGATATTT TGATATTGGA TGAACCTAAC
GAAGGTATCC AACCAAATAT TGTCCAGCTC ATTAGGGATG TGTTGTTAAA GCTAAATAAA
GAGCAAGGGC TAACCATTGT GTTAGTAGAG CAAAAGCTTC CCTTCGCAAG AGCGGTGGGT
GAAACTTTTG CATTGATGGA AAAAGGTCAG GTAATTGCTA CAGGTGATAT GCCGGATTTA
AACGACGAAC TTGTTAGTAA GTATTTAGCC GTATAG
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| Protein sequence | MIELQNIDQQ YSGTQILWDA NLKIEKGSRT VIMGRNGVGK TTLLNVIMGL LPISGGKLTI
NNKDMSKASV ESRPEIGVGY VPQGRHIFPQ LTVEENLKIS LNCKRQTSKT IPEHIFELFP
VLKEMLHRRG GDLSGGQQQQ LAIARALVLN PDILILDEPN EGIQPNIVQL IRDVLLKLNK
EQGLTIVLVE QKLPFARAVG ETFALMEKGQ VIATGDMPDL NDELVSKYLA V
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