Gene MADE_00871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00871 
Symbol 
ID6777298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp917563 
End bp918384 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content41% 
IMG OID642754303 
Producthypothetical protein 
Protein accessionYP_002125179 
Protein GI196155690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCA AACTGCAAGC TCTTGAACAA ACAATCGGAA CCATGACCCA GGAAGGCGTG 
GAGTATATTT GTATTACAGA TATTGCCCGG TTCAAAAATA AAGACCGAAC CGGTGTGATA
ATCGGTAATT GGTTGCGGAA CAGAAATACC ATCGAGTTTT TAGGTATTTG GGAGCAACTC
AATAAATCTC TTTTTAAAGT CATCCAATTC GATGACTTTA AAAAAGAAGG AGGGTTGAAT
AGTTTCACAC TAACGCCCAA ACAGTGGATA GAGAAAACCA ATGCGATTGG ACTCATTTCA
AAGGCCGGTC GCTATGGAGG TACCTACGCA CAAAAAGATA TTGCTTTTGA GTTTGCCAGC
TGGATTTCTG TTGAGTTTAA ACTCTATTTG ATTAAAGAGT TCCAACGTTT AAAAGAACAA
GAGTTCGAAC AACTTGGCTG GGATATTCGA CGTAATCTCG CAAAAGTGAA TTACCTGATC
CATACCGATG CGGTAAAAGA GCACCTCATT CCGGAAACGC TAAATAACCA ACAAATAGCC
TGTGTATACG CCACCGAAGC AGATCTGCTA AATGTTGCAC TTTTTGGTGT TACGGCTAAG
CAATGGCGCG ATAAAAACCC TCAGCTCAGC GGCAATATGC GCGATCACGC CAACATTCAT
CAACTTGTTT GTTCAGCTAA TATGGAATCC ATGAATGCCT ATTTTATTCA GCAGGGCATT
AAGCAATCAG AGAGGATTGT AAAACTGAAC CAATTAGCCA TTCAGCAAAT GCAGGTCCTG
ATTGCAGCAA ATACCTCCAA AAATCCATTA TTAAAGGAGT AA
 
Protein sequence
MKPKLQALEQ TIGTMTQEGV EYICITDIAR FKNKDRTGVI IGNWLRNRNT IEFLGIWEQL 
NKSLFKVIQF DDFKKEGGLN SFTLTPKQWI EKTNAIGLIS KAGRYGGTYA QKDIAFEFAS
WISVEFKLYL IKEFQRLKEQ EFEQLGWDIR RNLAKVNYLI HTDAVKEHLI PETLNNQQIA
CVYATEADLL NVALFGVTAK QWRDKNPQLS GNMRDHANIH QLVCSANMES MNAYFIQQGI
KQSERIVKLN QLAIQQMQVL IAANTSKNPL LKE