Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00864 |
Symbol | |
ID | 6777628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 909171 |
End bp | 910007 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642754296 |
Product | predicted transcriptional regulator i A1501 |
Protein accession | YP_002125172 |
Protein GI | 196155683 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGACA AAGCGGAATC GAAGTATTTT TGGCTAATTG AACTGCTTGC GTATTGGCAA GGAAAAGTAA ATAGTAAAGA TCTTATTGAT GCATTTTTTA TAAGTGCTAC ACAGGCCAAG AAATATTTAT CAGCTTACAA TTCCCTTTAT CCCTCACAGC TAATCTACAA CCGTAGTGTG AAAGCGCATC AAACACAGAC TGAATTCAAC GCCCAATTTA TATCTACTGA TGTTGCCGAG TATTTAGATT GGCTAAACGG CTATCGCGCT AAAACGAGTA GCTCAAATCA ATCTTCAATA TCGACTGAAT TGAAGATCCC TTCAAGGCGA GTAAGCCCCC AGGTAATGCG AGGGCTCATA GGTGCAATTA AACAACGGAG GCGCGTTGAC GTTGAATACT TGTCACTGAA CACGTCTTCG TTTGAAGATC GAGTAATTCA GCCTCATTCT CTCGTTAAAA CTGGTTTACG TTGGCACTTG AGAGGGTATT GTGAGTATCG CTCTGAATTT CGTGATTTTG TATTAAGCCG TTTCCGCGGC ACACCGTTGT TAATGGATCA AGCCACATTT TTTGAAAAAG ATGATCCAGG TTGGAATACA GAAATCTTTT TGCGAATACA GCCCGATCCA AGGTTCTCAA AAGCGCAAAG CGCTGTTATT GAGCAAGACT ATCAGATGAA GAACGGCGAA TTACTGATTA AGATAAAGCC CGCATTAGCC CAATACTTGA TTCAAGAAAT GCGCGTAAGA ACCGAGTTTC TAGCGAAAAC ACCTCAACAG CAGCAGCTTG TACTGGTAAA CGAAAGCGAC GTAAAAGAAT GGCTATTCGG TAACTAG
|
Protein sequence | MEDKAESKYF WLIELLAYWQ GKVNSKDLID AFFISATQAK KYLSAYNSLY PSQLIYNRSV KAHQTQTEFN AQFISTDVAE YLDWLNGYRA KTSSSNQSSI STELKIPSRR VSPQVMRGLI GAIKQRRRVD VEYLSLNTSS FEDRVIQPHS LVKTGLRWHL RGYCEYRSEF RDFVLSRFRG TPLLMDQATF FEKDDPGWNT EIFLRIQPDP RFSKAQSAVI EQDYQMKNGE LLIKIKPALA QYLIQEMRVR TEFLAKTPQQ QQLVLVNESD VKEWLFGN
|
| |