| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00823 |
|---|
| Symbol | |
|---|
| ID | 6778193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 854889 |
|---|
| End bp | 857630 |
|---|
| Gene Length | 2742 bp |
|---|
| Protein Length | 913 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642754255 |
|---|
| Product | phage uncharacterized protein |
|---|
| Protein accession | YP_002125131 |
|---|
| Protein GI | 196155642 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5410] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAA CGAAGAAACT CTGCCCTAAG TGTCAGAACG AATTACCTAT AACCTTGTTC
GTGGGCTCGG TATGCCACGA ATGTAAGGTA TCGCATCTGC AAAGTGTTGA GCTCGCAGGG
GCAAAAAAAC GCATGTCTGA CGACCAGCGC GAGATGCTCA AGCAACAAGC AGATGAAATA
AAATACGAAG AAGAGCAGCG AAAAATAGAA GAAGCTAAAC TTCTCGACAG AAAAGCTGCC
GCGCGCAAGG AGCAGGCCGA ACGGGAGTTG TCGCGACGTA GACTCCTCCC GTTTGTCCAG
CGATTCAACC CGGAGTACAT GCCGGGCTGG GTGCACATCG ACATTTGTTC GAAACTCGAA
AAATTCTCGC AAGACGTCAT CGATAAAAAA TCCCCACGAC TTATGTTGTT CTTACCGCCA
CGTCACGGTA AAAACATTGC CCATTCAACA CCGGTGCTAA CTGCTAACCG AGGATGGGTA
ACGCACGGCG ACCTAGTACC TGGGGACCAG GTTTTTCATC CGTCGGGTAA ACCAGTAGAC
GTACTAGCGC TTTCTGATGA AGCGGTAGAT GACTACGTTG TTACTTTCAC TAACGGCGAG
AAAATCAGAT GCCATGCTAA CCATGAGTGG ACAGTATACT CACGCGCAGA CAAACAAGAA
AAAACGGTAG AAACCAAATG GTTTCTGGAG AACACTAATC GCGGTACGCC TCGAAGCCTA
ACAGCAGGAA ACAGGTTCCA GTTCCAAGTA CCTAAAACAA ACGCACTAGA ATTCGACAGT
GCTGACCTGC CTATGCACCC CTACGTGCTA GGCGCATGGT TGGGGGACGG AACAAAGAAT
TCTGGTTGTA TTACCCATGA CAAGAAAGAT CAGCCAGTAA TAGACAAAAT AACGCGTTGT
GGGTACGAAG TATCATCATG GACGGTACAC AAGCAGACAG GTGTATACAC TACTAGGTTC
AGCGGTCCTA GGCCGAATGT CGCAGGCCGA ATGTTCAAAG AGTTAAAAGA ACTAAACGTA
CTAAACAATA AACACATCCC AGAAGTGTTC CTACGGGCGT CATTAAAAGA CAGGTTAGAA
CTATTAGCTG GCCTTATAGA TACCGACGGA CACACGGATA AGAACAGCCG AATGCGTTTC
ACCACAGCGG ACAAACCGCT AGCCAACGGT GTTTTAGACC TATGTACGAC GCTAGGGTTC
AAACCATACA TAGAAGAAAT ACAACCTAAA CTCTCTACGA GTTGTATACA AGGAACTAAG
CCATATTTCG TTGTGGGGTT TAACCCTACA ATGGTTATTC CCGTAGCTCT ATCACGAAAA
AGAATCACAA GATTCCCTAC TGAAAGACGA GTATCAATAG AAAAAGTAGA ATATTTACCG
AACGGTGAAA AAGGGCATTG CATCCAGGTT GATTCCCCAG ACGGTCTATA TCTAGTCGGT
AAAAAGCTAG TAGCGACACA TAATTCAGAA CTCGCGTCGA AAACCTTTCC GGCCTGGCAC
CTAGGACGAA TGCCCAAGCA CGAAGTAATC GCGTCGTCGT ATGCTTCGGA CCTCGCCATG
GACTTCTCGC GCAAAGTACG TGGGATCTTA GCCGACCCAG ATTACGGGCG CATATTCAAG
ACCCGACTAG ACAAAAAGTC TCAATCCGCG GAACGATGGA ACACTGATGC TAACGGCGGA
TACGTAGCTG CGGGCGTCGG TGGCGCAATC ACAGGGAGGG GGGCCCACAT CGGAATAATA
GACGACCCGA TTAAAAACCG AGAGGACGCA GAATCTGCGA CCAACCGCCA GAAAATCAAA
GACTGGTACA CCTCGACGTT TTATACGCGT CTTGCTCCAG GCGGCGGTGT ACTTGTTATT
TTAACGCGCT GGCACGACGA CGACCTAGCC GGCTGGCTTA TCGACCAAGA GAACGAAGGC
GGTGACAAAT GGGAGATTGT CCGTTATCCC GCGATCGCCG TGAGCAACGA GAAATACCGT
CTCAAAGGCG ACGCACTCCA CCCCGACCGA TATCCGCTGG ATGCACTCGA GCGAATCAAA
CGCGCCGTTG GCGACAGAGA TTGGTCGGCC CTTTACCAGC AGAACCCTGT ACCGGACGAG
GGCGCCTACT TTCAAAAAGA TTGGTTCAGG TATTACGAGG TCGAACCCCC ACGAGAGCGA
CTGAAAGTTT ATCAAGCGTG GGACTTCGCC ATTGGTACCG CAGAACATAA CGACTACACA
GTAGGTGTAA CTATCGGTAT CGACCGCGAT GACAAAGCGT ATCTGCTTAA CGTTGCACGC
GGTAAATGGG ACGCGCTAGA AATCATCGAG AAAATCATCG ACGAGTACAC AGCGTTCTTG
CCTCAAGTTG TTGGGTTCGA AAAAGGCCAG ATTGAAATGG CCCTAGGTCC TATGCTCCGC
AAACGTATGC GAGAGCGCAA AACATTCTTT GCTTATGAAG AACTGAAAAC AGGACGCCGC
GATAAATCCG CTCGTGCCCG TCCATTACAA GGTCGTATGC AACAGGGCAT GGTGCTACTT
CCTAAGAACG CAGAATTTAC AAACGAGATC CGCAACGAGA TGCTGCGATT CCCAGCTGGG
ACACACGACG ACCAGGTCGA TGCTTTTTCG TGGGCGTTCC AGATGCTAGA TCAGTTCATC
GTGACCCACG ACCCAAAACC TAAGAAAAAG AAATCATGGA AAGACAGACT CAACAAGTAC
GTTACTAACT CAACCAAACG ACGGAGCTAC ATGCGCGCAT GA
|
|---|
| Protein sequence | MTITKKLCPK CQNELPITLF VGSVCHECKV SHLQSVELAG AKKRMSDDQR EMLKQQADEI
KYEEEQRKIE EAKLLDRKAA ARKEQAEREL SRRRLLPFVQ RFNPEYMPGW VHIDICSKLE
KFSQDVIDKK SPRLMLFLPP RHGKNIAHST PVLTANRGWV THGDLVPGDQ VFHPSGKPVD
VLALSDEAVD DYVVTFTNGE KIRCHANHEW TVYSRADKQE KTVETKWFLE NTNRGTPRSL
TAGNRFQFQV PKTNALEFDS ADLPMHPYVL GAWLGDGTKN SGCITHDKKD QPVIDKITRC
GYEVSSWTVH KQTGVYTTRF SGPRPNVAGR MFKELKELNV LNNKHIPEVF LRASLKDRLE
LLAGLIDTDG HTDKNSRMRF TTADKPLANG VLDLCTTLGF KPYIEEIQPK LSTSCIQGTK
PYFVVGFNPT MVIPVALSRK RITRFPTERR VSIEKVEYLP NGEKGHCIQV DSPDGLYLVG
KKLVATHNSE LASKTFPAWH LGRMPKHEVI ASSYASDLAM DFSRKVRGIL ADPDYGRIFK
TRLDKKSQSA ERWNTDANGG YVAAGVGGAI TGRGAHIGII DDPIKNREDA ESATNRQKIK
DWYTSTFYTR LAPGGGVLVI LTRWHDDDLA GWLIDQENEG GDKWEIVRYP AIAVSNEKYR
LKGDALHPDR YPLDALERIK RAVGDRDWSA LYQQNPVPDE GAYFQKDWFR YYEVEPPRER
LKVYQAWDFA IGTAEHNDYT VGVTIGIDRD DKAYLLNVAR GKWDALEIIE KIIDEYTAFL
PQVVGFEKGQ IEMALGPMLR KRMRERKTFF AYEELKTGRR DKSARARPLQ GRMQQGMVLL
PKNAEFTNEI RNEMLRFPAG THDDQVDAFS WAFQMLDQFI VTHDPKPKKK KSWKDRLNKY
VTNSTKRRSY MRA
|
|---|
| |