Gene MADE_00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00580 
Symbol 
ID6777105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp615953 
End bp616285 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content41% 
IMG OID642754015 
Productpredicted membrane protein 
Protein accessionYP_002124892 
Protein GI196155403 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTC AAACCAGCGA AAACACGCAT TTCACTTCAT TTAAAGCGTT TTACCCTTTT 
TATTTAAACG AACATAAAGA TGGAACTTGC CGCACCTTAC ATTTTATTGG CTCATGGCTG
GTCATTGGTG TGATTGCTTT GGCAATTTAT ACCGCTAACT GGCCACTTTT ATGGTTTATA
CCTGTTATAG GTTACGGCTT TGCTTGGGTC GGTCACTTCT TTTTTGAAAA AAACCGCCCC
GCTACGTTCA AGCACCCACT TTACAGCTTG ATGGGCGACT GGGTGATGTT TAAAGACATC
TTAACTGGAA AAATCAGTTT GAAGGGCGAG TAA
 
Protein sequence
MTTQTSENTH FTSFKAFYPF YLNEHKDGTC RTLHFIGSWL VIGVIALAIY TANWPLLWFI 
PVIGYGFAWV GHFFFEKNRP ATFKHPLYSL MGDWVMFKDI LTGKISLKGE