Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00580 |
Symbol | |
ID | 6777105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 615953 |
End bp | 616285 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642754015 |
Product | predicted membrane protein |
Protein accession | YP_002124892 |
Protein GI | 196155403 |
COG category | [S] Function unknown |
COG ID | [COG4323] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTC AAACCAGCGA AAACACGCAT TTCACTTCAT TTAAAGCGTT TTACCCTTTT TATTTAAACG AACATAAAGA TGGAACTTGC CGCACCTTAC ATTTTATTGG CTCATGGCTG GTCATTGGTG TGATTGCTTT GGCAATTTAT ACCGCTAACT GGCCACTTTT ATGGTTTATA CCTGTTATAG GTTACGGCTT TGCTTGGGTC GGTCACTTCT TTTTTGAAAA AAACCGCCCC GCTACGTTCA AGCACCCACT TTACAGCTTG ATGGGCGACT GGGTGATGTT TAAAGACATC TTAACTGGAA AAATCAGTTT GAAGGGCGAG TAA
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Protein sequence | MTTQTSENTH FTSFKAFYPF YLNEHKDGTC RTLHFIGSWL VIGVIALAIY TANWPLLWFI PVIGYGFAWV GHFFFEKNRP ATFKHPLYSL MGDWVMFKDI LTGKISLKGE
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