Gene MADE_00424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00424 
Symbol 
ID6778200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp439643 
End bp440161 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content49% 
IMG OID642753853 
Productputative hydrolase/phosphatase protein 
Protein accessionYP_002124736 
Protein GI196155247 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.465946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAG AGCAGATGAA TTTGACCGGC ATTAAAGGTG TAATATTCGA TTTAGACGGC 
ACCTTAGTAG AGTCTAGCCT TAACTTCACG CAAATGCGCG CCGACGTAGG CTGCCCACAA 
AACGAAGACA TTCTTACCTT TGTTGATGCC CTTAGCTGCG CCGAAACCAA AGCGAATGCT 
CACCGAGCTA TATTGCAGCA CGAACTAGAC GATGCGCAAA ATGCGAAATG GCTAGAGATA 
GGCAAAGCCA TGGTAGAAAA AGTGCAAGCT CATAATTTAC CCATGGCGAT AGTTACCCGG 
AACTGCCGCC AAGCTACCGC TATTAAAGTC GCCAATAACG GCATTCCCAT CGACTACGTG 
CTTACCCGCG AAGATGCCCC AGCCAAACCC GATCCAACAG CCTTATTAAT GGTGGCGAAC 
ACCTGGCAGC TTCAACCTGA AGACTGCCTG TATGTAGGCG ATTTTATTTA TGACCAGCAA 
GCCGCCGAGA ATGCTGGGAT GAAGTGGTTG TTGGTTTAG
 
Protein sequence
MSVEQMNLTG IKGVIFDLDG TLVESSLNFT QMRADVGCPQ NEDILTFVDA LSCAETKANA 
HRAILQHELD DAQNAKWLEI GKAMVEKVQA HNLPMAIVTR NCRQATAIKV ANNGIPIDYV 
LTREDAPAKP DPTALLMVAN TWQLQPEDCL YVGDFIYDQQ AAENAGMKWL LV