| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00374 |
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| Symbol | |
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| ID | 6779065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 392556 |
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| End bp | 395663 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642753803 |
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| Product | putative RND efflux system protein |
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| Protein accession | YP_002124686 |
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| Protein GI | 196155197 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATA ATATTATTCG TCTTTCAGTA GAAAGACGCT TTTTGTTTCT TGTTCTTGCA
CTAATCTTAA TTGGGATCGG CGTTTGGAGC TACCAGCGAT TACCTATTGA TGCTGTACCA
GATATTACAA ATGTACAGGT TCAGATTAAC ACCAAAGCTC CGGGGTACTC ACCATTAGAA
GCTGAACAAC GAATAACATT TCCTGTCGAA ACAGCACTAT ATGGCTTGCC TAACTTATCC
TATACACGTT CTATATCGAG GTATGGTCTT TCACAGATTA CAGTTATTTT CGAAGAAGGA
ACGGATATCT TTTTTGCCCG AAATTTAATC GACGAAAGAC TTGCTAACCT TAAAAGTGTT
TTACCTGATG GCCTTGAGCC AGAAATGGGG CCAATCGCAA CAGGGCTTGG CGAAATTTTC
GTATATACAC TGGAAGGGAA AGATGGAGCA ACGTTACCCG ATGGCTCGCC GGTCACACCT
ATGGCTTTAA GAGAGGTACA AGATTGGATC ATTCGACCAC AGTTAGCCCA GGTTCCGGGA
GTAGTAGAAG TAAACACTAT TGGAGGTTAT GACAAGCAAT ATCACGTCAA TCCCGACCCT
GTAAAAATGC TGGAGATGGG AGTCTCGCTT AAAGACATTT CTGAAGCACT ATATTTAAAC
AATGATAATG CTGGAGCAGG CTATATTGAG AAAAATGGCG AGCAACTTCT TGTTCGCTCT
CCAGGTCAAT TGACAGGGAT AAAGGATATC GAAAATGTCG TAGTAGGAAA AAAAGGATCT
GTTCCTGTTC TAATAAAAGA TATTGGAACT GTAGGCTTGG GTAAGCAGCT GAGGACCGGT
GCCGCTACAA GAAATGGTAA AGAGACAGTG ATGGGAACGG TCATGATGTT GCTGGGAGAA
AACTCAAGGG AAGTTGCAGC TTTAACTGCC AGTAAATTAA CTGAAATTCA AAGATCGTTA
CCAAGCTGGG TAGTTACTGA ACCCGCCTAT GATCGAACTA CACTGGTCGA CAAAGCGATA
AACACTGTGC AGAAGAACCT GCTGGAAGGA GCATTACTCG TAATTGTCAT ATTATTTTTA
CTACTAGGCA ATATTCGAGC GGCTCTTATT ACGGCTGCGA TCATACCTAT TGCTATGATG
ATGACAATCA CTGGAATGGT CCAGAGAGGT GTTTCGGCAA ATCTGATGAG TTTGGGGGCT
TTAGATTTTG GTCTGATTGT CGATGGCGCT GTCATCATTG TTGAAAACTG TATTAGGCGC
TTATCTGAAG CGCAACAGCA TCACGGCAGA CTTCTTCAAC TCAAGGAACG TCTAGAAGAA
GTGAAAATAG CAACGATTGA AGTAATCAGG CCCAGCTTAT TTGGAGTCGG GATCATAACC
GCTGTTTATC TGCCTATTTT TACTTTAACA GGCGTAGAGG GAAAGATGTT TCATCCCATG
GCAATAACTG TTGTTATCGC TCTTATTGCG GCAATGATTT TGTCACTGAC GGTAGTGCCT
GCAGCGATCG CAATTTTCAT GGGGGGAAAA ATCAGTGAAA AGGAGAGTTT TTTAATACGT
TGGGTGAAAC TGGCTTACGA ACCAGCACTT AGGGCTATTC TTAAATTTAA AGCTGCTGCT
CTTGGGGCTG CACTAGCGTT TGTTGTCTTC TGCGGATGGT TGGCAACAAC ACTTGGGTCT
GAATTTATTC CTCAACTGGA TGAAGGTGAT GTCGCTTTAC AGGCTTTACG CATAACGGGT
ACCGGTCTAA ACCAATCAAT TCAAATGCAA GAATTACTTG AAGGTGCGCT GTTAGAAATT
CCAGAGGTAG CGGTAGTCTT TGCGAAAATA GGTACACCAG AAGTCGCTAC AGACCCAATG
CCTCCTAATG TAGCCGATAG TTTTGTAATA CTTAAACCTC GCTCAGAATG GCCTGATCCA
GCTAAATCTA AATCGGATCT AGTGGCTGAA ATTGAATCAG TCGCCTCAAA GCTTCCCGGT
AATAACTATG AATTTACCCA ACCAATTCAA ATGAGATTTA ATGAATTGAT TTCCGGCGTA
AGGGCTGATG TTGCAGTCAA GGTTTTCGGT GATGACTTAG AGCAATTGTT GGATTCTGCA
AATAAGGTTG CTGAGATCGC TGAGTCGATA CAAGGTGCCT CAGACACCCG AGTTGAGCAA
GTTGCCGGCC TTCCTATGTT GTCCATATTA CCAAAACGAG ATGCTCTCGC AAGGTACGGT
CTTAACGTAG CAGACATTCA AGCACTCGTT TCAACCAGCA TAGGGGGTAA GGAATCAGGC
ATAATCTATG AAGGCGATCG TCGGTTTAAA ATTGTAATCA GATTATCTGA AGAGTTGCGT
ACAAATATTG ACAAATTAGA GAGCTTACCT GTTCGTGTCG GCAATAGTTT TGTACCGCTT
GAAGAGGTAG CCACTCTCGA GTTAAAGCCG GCGCCTGCAC AGATCAGCCG AGAGAATGGA
AAGCGCAGAG TTGTCGTAAC GACTAACGTA CGAGGAACCG ACCTAGGAGG ATTTGTCGTT
GATTTACAAA AAAGACTTAA ATCCGATTTA AAAATGAAGG AAGGATATTG GTTAGAGTTT
GGTGGTACCT TTGAACAACT GGAATCCGCC AGCAAACGGC TGACTTTAGT CGTTCCGGTT
ACGCTTGCGT TGATAGTTGG CATACTCATT ATGGCGTTTG GGTCTGTTAA AGACGCATTG
ATAATTTTCA CTGGTGTACC ACTAGCCTTG ACTGGAGGAG TACTGGCACT CTGGATTAGA
GATATGCCTC TTTCAATTTC TGCGGGAGTA GGCTTTATCG CTTTGTCCGG GGTCGCGGTT
TTGAATGGAC TAGTGATGGT CGCATTCATC AGACAACTCT GGCAGGAAAA TGGTGATATT
TATACTTCAG TAATTCGAGG GGCCATAATC CGGCTTCGAC CTGTTTTGAT GACTGCGTTA
GTGGCCAGCT TAGGCTTTGT TCCCATGGCA CTTAATACAG GAACAGGTGC TGAAGTACAA
AGACCGCTCG CCACTGTAGT CATTGGGGGA ATTATATCGT CAACTTTACT GACACTGTTT
ATATTACCTG CGCTTTATCA GCTCGCACAT AACAAACGCA ACTCTTAA
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| Protein sequence | MIDNIIRLSV ERRFLFLVLA LILIGIGVWS YQRLPIDAVP DITNVQVQIN TKAPGYSPLE
AEQRITFPVE TALYGLPNLS YTRSISRYGL SQITVIFEEG TDIFFARNLI DERLANLKSV
LPDGLEPEMG PIATGLGEIF VYTLEGKDGA TLPDGSPVTP MALREVQDWI IRPQLAQVPG
VVEVNTIGGY DKQYHVNPDP VKMLEMGVSL KDISEALYLN NDNAGAGYIE KNGEQLLVRS
PGQLTGIKDI ENVVVGKKGS VPVLIKDIGT VGLGKQLRTG AATRNGKETV MGTVMMLLGE
NSREVAALTA SKLTEIQRSL PSWVVTEPAY DRTTLVDKAI NTVQKNLLEG ALLVIVILFL
LLGNIRAALI TAAIIPIAMM MTITGMVQRG VSANLMSLGA LDFGLIVDGA VIIVENCIRR
LSEAQQHHGR LLQLKERLEE VKIATIEVIR PSLFGVGIIT AVYLPIFTLT GVEGKMFHPM
AITVVIALIA AMILSLTVVP AAIAIFMGGK ISEKESFLIR WVKLAYEPAL RAILKFKAAA
LGAALAFVVF CGWLATTLGS EFIPQLDEGD VALQALRITG TGLNQSIQMQ ELLEGALLEI
PEVAVVFAKI GTPEVATDPM PPNVADSFVI LKPRSEWPDP AKSKSDLVAE IESVASKLPG
NNYEFTQPIQ MRFNELISGV RADVAVKVFG DDLEQLLDSA NKVAEIAESI QGASDTRVEQ
VAGLPMLSIL PKRDALARYG LNVADIQALV STSIGGKESG IIYEGDRRFK IVIRLSEELR
TNIDKLESLP VRVGNSFVPL EEVATLELKP APAQISRENG KRRVVVTTNV RGTDLGGFVV
DLQKRLKSDL KMKEGYWLEF GGTFEQLESA SKRLTLVVPV TLALIVGILI MAFGSVKDAL
IIFTGVPLAL TGGVLALWIR DMPLSISAGV GFIALSGVAV LNGLVMVAFI RQLWQENGDI
YTSVIRGAII RLRPVLMTAL VASLGFVPMA LNTGTGAEVQ RPLATVVIGG IISSTLLTLF
ILPALYQLAH NKRNS
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