Gene MADE_00312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00312 
Symbol 
ID6776160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp340702 
End bp341472 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content38% 
IMG OID642753741 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002124624 
Protein GI196155135 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACATTG AGCTCGTTTT CATAAACGAT GTTCAGGAAA ATGCGAGCTT TATCAAACGA 
ATTTGTCGTA CACACAATAT TGTTTATTCC ACCGAACGCC CAAGTGTCGT GACTCTTAAA
GAATATTTAA ATGACGAGCA GACAGTCTTT GTTGTAGCAG ATTACGGATA CAAACTACCC
ATAAACGAAA TAAAATATGC GATTAATATC CACCCATCTT TACTACCCAA AAGTAGAGGC
CCAACCCCAC TAACCTACAT TATCGACAAC CCTGAGAACG CGGGTGTTAG CATTCATAAA
CTTACTGAGA AACTTGATGC AGGTAGCATC CTAATCCAAG AGAAATTTGA GGTCGAAGAC
AATGAAACGA TATCATCATT GATGGTCAAG TCTCAGTTAC TCGCAGAAAC TCTGTTAGAA
GAATTACTCA ATAACTTTAA TGAGCTTTAT AATAACGCCA CACCTCAATT GGAAAAGCTA
GCGTCATTCC AAAGTCTACC TCCAGTAAAA AGAAGGTTTG TAAATTGGGA TCAAAACACC
ACTCAATTTA GTCATGCTCT TCGACAATAC GGGCACTTTG GGATTCTTAT TTCGTTAGAT
AACGCGTTAT ATATCGCAAA TGATGTCGAA GTCACAACTT TCAGTCACGA TTTCACGTGC
GGTAGCGTAA TCTTTGAGGA TGCACTAATT AAAAGCATTG CTATAAATGA TGGCTATGTT
GTACTTTCTA AGCGTAGTTT AAGGCTATAT GAATCAAGAG TACTAAACTA G
 
Protein sequence
MNIELVFIND VQENASFIKR ICRTHNIVYS TERPSVVTLK EYLNDEQTVF VVADYGYKLP 
INEIKYAINI HPSLLPKSRG PTPLTYIIDN PENAGVSIHK LTEKLDAGSI LIQEKFEVED
NETISSLMVK SQLLAETLLE ELLNNFNELY NNATPQLEKL ASFQSLPPVK RRFVNWDQNT
TQFSHALRQY GHFGILISLD NALYIANDVE VTTFSHDFTC GSVIFEDALI KSIAINDGYV
VLSKRSLRLY ESRVLN