Gene MADE_00238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00238 
Symbol 
ID6775576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp255032 
End bp256048 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content50% 
IMG OID642753666 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_002124550 
Protein GI196155061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAT TAGTCACCGG TGGTGCTGGC TATATCGGCT CACATACCTG TATCTCGTTA 
GTTGAAGCAA GCCATTCTGT TGTGGTAATT GACGACTTCT CTAACAGCCA CGCCGAAGCA
CTTAAGCGGG TAGAAGGTAT TTGTAATACA GAGATCCCTC ATTATGAGGG TGACGTGGGG
GATGAAGAGC TGCTCAGACG TGTTTTCTCA GAGCACACCT TTGATGGCGT CATTCACTTC
GCCGGCTCAA AAGCAGTGGG GGAATCTGTT GAGAAACCTA TGCTTTATTA CCGAAACAAC
GTTACTGCCA GCCAGACTTT AATAGAAACT ATGCATCAGG CTGGCGTACA TACGTTAGTG
TTTAGCTCTT CAGCGACAGT TTACGGCGAC CCGCAAACTG TACCTATTGT GGAAGACTTT
CCCGTCGGCG CGACCAATCC CTACGGCAGA AGTAAACTCA TGGTAGAGCA AATCATACAA
GATTTTGCGA CTGCCACGGC TCAATTTAAC GGTATTATTT TGCGCTACTT TAACCCAGTG
GGCGCTCATC CTTGCGGACG GATTGGAGAA GACCCAAGTG GAATCCCAAA TAATTTAATG
CCTTTTATTG CACAAGTGGC CGTGGGCAAG CGCTCTCATC TGGCCGTATT TGGCGATGAC
TACCCCACCA ATGATGGCAC TGGAGTGCGC GACTATATAC ACGTATGTGA CTTAGCGGAA
GGGCATGTTC GCGCTTTGGA GCAATTGCAT GGAAAACCGG GCAGTCACTG CTTAAATCTA
GGAACGGGTA GCGGTGTTTC AGTGCTAGAG ATGGTAGACG CCTACGCGAA AGCAAGTGAC
CGACCTATCC CTTATCAAAT TGCTCCCCGT CGCCCCGGCG ATGTGGCACA GTGTTACGCC
AACTCAAGTC ACGCTAAAGA GGTGCTGGGA TGGCAAGCCA CCCGCACCTT AGAAGACATG
GTGAAAGACA GTTGGCGATG GCAGTCGTCT AACCCTAACG GCTATCGCGA AGCCTAA
 
Protein sequence
MHILVTGGAG YIGSHTCISL VEASHSVVVI DDFSNSHAEA LKRVEGICNT EIPHYEGDVG 
DEELLRRVFS EHTFDGVIHF AGSKAVGESV EKPMLYYRNN VTASQTLIET MHQAGVHTLV
FSSSATVYGD PQTVPIVEDF PVGATNPYGR SKLMVEQIIQ DFATATAQFN GIILRYFNPV
GAHPCGRIGE DPSGIPNNLM PFIAQVAVGK RSHLAVFGDD YPTNDGTGVR DYIHVCDLAE
GHVRALEQLH GKPGSHCLNL GTGSGVSVLE MVDAYAKASD RPIPYQIAPR RPGDVAQCYA
NSSHAKEVLG WQATRTLEDM VKDSWRWQSS NPNGYREA