Gene MADE_00235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00235 
Symbol 
ID6776159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp250458 
End bp251048 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content51% 
IMG OID642753663 
Productsingle-strand binding protein 
Protein accessionYP_002124547 
Protein GI196155058 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.508026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA AAGGCGTTAA TAAGGTTATT CTTGTTGGAA ACCTTGGCAA TGATCCTGAA 
GTTAGATACA TGCCTAACGG AAACGCCGTT GCGAACTTAA GCCTAGCAAC TAGCGAAAGC 
TGGAAAGACC AACAGGGTCA GGTTCAAGAG CGCACTGAGT GGCACCGCCT TACAATGTAC 
CGTCGCTTAG CAGAAATTGC CGGAGAGTAC CTGAAAAAGG GCTCGCAAAT TTACGTAGAA 
GGTAAATTGC AAACGCGTAA GTGGCAAGAT CAGCAAGGTC AGGATAAGTA CACCACTGAA 
ATTATCGTAG ATCAAATGCA AATGCTTGGC GGTCGCGGCG GTGATGGTGG CGGCGGAAAC 
GGCGGTTACC AGCGTCCTCA AAACAACCAA GGCGGTTATA ATCAAGCGCC AGCGCAAGGT 
GGTTACAACC AGGCTCCACA ACAAGGTGGA GGCCAGCAAG GCGGCTATAA CCAGAGCCAG 
GGCCAAGGCG GTGGTTATAA TCAAGCGCCG CAGGGTGGTA ACCCGTCACA GCCTAAGACT 
CCGCCTATGG CTGAACCAGA CTTCGATTTT GACGACGATA TTCCGTTCTA G
 
Protein sequence
MATKGVNKVI LVGNLGNDPE VRYMPNGNAV ANLSLATSES WKDQQGQVQE RTEWHRLTMY 
RRLAEIAGEY LKKGSQIYVE GKLQTRKWQD QQGQDKYTTE IIVDQMQMLG GRGGDGGGGN 
GGYQRPQNNQ GGYNQAPAQG GYNQAPQQGG GQQGGYNQSQ GQGGGYNQAP QGGNPSQPKT 
PPMAEPDFDF DDDIPF