Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00208 |
Symbol | |
ID | 6776277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 224607 |
End bp | 225656 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642753636 |
Product | glycosyl transferase |
Protein accession | YP_002124520 |
Protein GI | 196155031 |
COG category | [C] Energy production and conversion [G] Carbohydrate transport and metabolism |
COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
TIGRFAM ID | [TIGR00661] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGGCA CCGGAAATGG ACACATTGCG CGTGCGCGAA TTATGGCTGC CGCCCTCGCC GAACGCGACG ATGTCAGCGT AGATTTTGTT TTTACTGGCC GTGCGCCAGA AAAGTATTTC GACATGGATG TATTTGGTGA CTATCAAACC TTCACCGGGC TGAGCTTTAT CACCAAAGGC GGTCGCGTTG ACAAATGGGC CACAGTTAAA CAAGCGAATA TTAGCCAGCT TCTAAAAGAC GCTAAAGCCT TTGATACCAA CGGATACGAT TTATTGGTTA ATGATTTTGA ACCTGTCACC GCATGGGCCG CTAAGCGCCA AGGGTTACCT TCAATATCCA TCAGTCACCA AGCAGCGTTT GCTTACGATG TTCCCAAAAG CGGCAATACG ATTTTTGACG CCCTGTTGAT GAAGGTATTC GCCCCTACGG AGCTTCAATT AGGTGTTCAT TGGTACCACT TCAACCAACC TATCATTCCG CCGTTTGTGG CAGAAAAACC AGCACTAACC TCGGGCAACG GACATGTACT GGTCTACTTA CCGTTCGAGG AAATAGAAGA TATACAGCAA ATGCTTGAGC CATTGAGCGA CCAAGTGTTT GAGTGCTTCC ATCCTAATAT CGAAGACGTT AAAGAGGCAG GTCACATTCA CTGGCACCCC ACGTCGAAGA AACATTTTCA GAAGGCCTTG CAACATTGTA GTGGTGTCAT TGCAAACGGT GGCTTTGAGC TATCAAGTGA AGCGCTGCAA CTGGGCAAAA AGCTTCTAAT TAAGCCATTA CACGGACAGT TTGAGCAGCT ATCTAACGTT TTAACGCTTA ACCAATTGGA CTTGTGCCAA ACGCTTTTTC AGTTAGATAC TGACATTGTT GAAGAGTGGC TGGAAGCACC AGCAAACGAA GCAATTACGT TTCCAGATAA CCCAAACATC CTCATTGACT GGCTTAAACG CAGAGACTTT TCTGACACCC AACGCTTATG CGATGCCCTT TGGAAAAACG TTCAATACGG CGATAAAACA CAAGAACGAT TATTGGCTCT TGCAATTTAA
|
Protein sequence | MQGTGNGHIA RARIMAAALA ERDDVSVDFV FTGRAPEKYF DMDVFGDYQT FTGLSFITKG GRVDKWATVK QANISQLLKD AKAFDTNGYD LLVNDFEPVT AWAAKRQGLP SISISHQAAF AYDVPKSGNT IFDALLMKVF APTELQLGVH WYHFNQPIIP PFVAEKPALT SGNGHVLVYL PFEEIEDIQQ MLEPLSDQVF ECFHPNIEDV KEAGHIHWHP TSKKHFQKAL QHCSGVIANG GFELSSEALQ LGKKLLIKPL HGQFEQLSNV LTLNQLDLCQ TLFQLDTDIV EEWLEAPANE AITFPDNPNI LIDWLKRRDF SDTQRLCDAL WKNVQYGDKT QERLLALAI
|
| |