Gene MADE_00186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00186 
Symbol 
ID6775571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp198961 
End bp199941 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content49% 
IMG OID642753614 
ProductHistone deacetylase/AcuC/AphA family protein 
Protein accessionYP_002124498 
Protein GI196155009 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAA AAATATTTCG CGGCAAACAT GGCACTAAAC ACGATTTGGG CAAAGACCAC 
CCAGAGTCGC CCGACCGCTT GTTTGCCATT GACGATCAGC TCCTTTCCTC TGGTTTAGAC 
ATGGTGTGTG AACACGCAGA TGCTACGCCT ATTGCTGAAG CTTACTTAAC GCTTGCCCAC 
GACCCTTACT ATGTAAAAAG TGTATTTGAA CAGGCTGCTC AGGCAATGTT TAGCGACCAT 
GAAAAAACGC AATACTCAGA AAGAAAGGAC AGCGTAGCCT GGCTTGACGA GGACACAGGC 
TTAATGCGAC ATAGTTTAAC CGCGGCGTTA GAGTCGGCGG GGGCAGGCTG TAATGCGGTA 
GACTGGGTGA TGGATGGTGA AGACCGGCAA GCATTTTGTG CAACCAGGCC GCCGGGCCAC 
CACGCCACTT ATGATAGTGC GATGGGTTTT TGCGTTTTTA ATAACATTGT TATAGCTGCC 
CGTTACGCAC TTCAAAACTA TGGGCTTAAA CGCGTGGCGA TTGTCGACTT TGATGTTCAC 
CATGGCAATG GCACCGAGCA AATTGTTGCA GGCGACCAAC GCATAATGCT GTGTAGCAGC 
TTTCAGCACC CATTTTACCC CCACAGTGGC TCACCAGTGT CGGCCAGTAA TATCTTGTCT 
GTACCTTTAG ACGCAGGAAC CACTGGTGAG GTATTTCGAG AAAAAGTGCA GCACTGGTTT 
GATGCCCTTC GCAACTTTCA GCCAGAACTC ATCCTAATAT CGGCCGGTTT TGATGCTCAT 
GCAGAAGACC CAATGGCTCA CTTGCGGTTA GTTGAAGATG ACTATTTCTG GGTAAGCGAG 
CAGCTGCGAA TTATTGCCGA TGAGTGCTGC AAGGGGCGCA TAATCAGCAT GTTAGAGGGG 
GGATATGATT TAAGCGCATT AGGGCGCAGT GTTGTAGCCC ACCTTAAAGG GATGAGTCGC 
CCGTCATCGA TAACCCCTTA G
 
Protein sequence
MTIKIFRGKH GTKHDLGKDH PESPDRLFAI DDQLLSSGLD MVCEHADATP IAEAYLTLAH 
DPYYVKSVFE QAAQAMFSDH EKTQYSERKD SVAWLDEDTG LMRHSLTAAL ESAGAGCNAV 
DWVMDGEDRQ AFCATRPPGH HATYDSAMGF CVFNNIVIAA RYALQNYGLK RVAIVDFDVH 
HGNGTEQIVA GDQRIMLCSS FQHPFYPHSG SPVSASNILS VPLDAGTTGE VFREKVQHWF 
DALRNFQPEL ILISAGFDAH AEDPMAHLRL VEDDYFWVSE QLRIIADECC KGRIISMLEG 
GYDLSALGRS VVAHLKGMSR PSSITP