Gene MADE_00123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00123 
Symbol 
ID6779115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp126744 
End bp127865 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content42% 
IMG OID642753553 
Productcysteine desulfurase 
Protein accessionYP_002124437 
Protein GI196154948 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTATT TCGATTCAGC AGGCTCTTTT CCCGTACTTG ATGAAGTGAA AGAGAAAGTC 
ATTGGCGCGT TTAACTTGCA TTACGCAAAC CCATCTTCAG ACCATGCTGC AGGAGCAATG
GCGGCTAATG AGCTTGAAAG AGTGCGCGAA AAAATTGCTG AATCGATTGG CGCAAGCCCT
AGCGAAATCA TATTTACTAG CGGAGCCACT GAATCAAACA ATTTAGCGTT AAAAGGCCTG
TTACATTGCG ATTTAGCTAA GAATAAAAAA CACATTGTTA CGAGTAAAAT AGAACATAAA
TGTATTCTGA GTATATGTAG CTACTTAGAA GCTTGCGGCT ACGAAGTAAC ATACTTATCG
CCAGACTCTA CGGGGCGAAT TTCAGCAGAT ACAGTAAAAA CCGCGTTGCG AGATGACACC
GCACTCGTCA GTATTATGCA TGTTAACAAT GAACTCGGGA CGCTAAACCC TATTAGTGAA
ATAGGTGAAC TGTGCTTCCG AAACAGAACG TTGTTTCATA CCGATGCAGC ACAAAGCTTT
GGCAAAACAG AAATCGATGT CGATGACATG AGTATTGATC TGCTATCTCT ATCTGCTCAT
AAAATAGGTG GAATAAAAGG TATAGGGGCG ATTTATATAA GAGATGCACG TGACATCGAT
GTTTTGCCCG TCATTCACGG TGCAGGGCAA GAACTGGGAA TTAGAGGTGG AACCGTTGCA
ACTCCACTAG TGGTCGGCTT AGGAGAGGCC TGTAAAGCTT TCCCAATCTA TTACGCTGAA
GCAGATTTTG GCCAAATTAC TGCGCATCTA GAGTGCGAAT TAAAAGGCAA AAACATCAGA
TACACCATTA ATGGCGGAAC CAGACTTCCT CACATCGTTT CACTAACATT GCCGGAAATT
GATGTGATTA CCTTTTTACT GGCTCACAGA GAAGACTTCT CGTTAGCGCA GGGATCAGCA
TGTTCCTCAA AAGAGATAGA GGCTTCACAT GTACTGAAAG CTATAGGGTT AGATAGAGAA
AAAGCTGAGC GAACAATTCG ACTCAGCTTC GACTTCAACA CAACTAAACA CGACATCAGC
ACTTTAGTTT CGAAACTAAA AGCTTTTATT GAAAGTGCCT AG
 
Protein sequence
MIYFDSAGSF PVLDEVKEKV IGAFNLHYAN PSSDHAAGAM AANELERVRE KIAESIGASP 
SEIIFTSGAT ESNNLALKGL LHCDLAKNKK HIVTSKIEHK CILSICSYLE ACGYEVTYLS
PDSTGRISAD TVKTALRDDT ALVSIMHVNN ELGTLNPISE IGELCFRNRT LFHTDAAQSF
GKTEIDVDDM SIDLLSLSAH KIGGIKGIGA IYIRDARDID VLPVIHGAGQ ELGIRGGTVA
TPLVVGLGEA CKAFPIYYAE ADFGQITAHL ECELKGKNIR YTINGGTRLP HIVSLTLPEI
DVITFLLAHR EDFSLAQGSA CSSKEIEASH VLKAIGLDRE KAERTIRLSF DFNTTKHDIS
TLVSKLKAFI ESA