Gene MADE_00071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00071 
Symbol 
ID6778966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp74380 
End bp74949 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID642753500 
Producthypothetical chorismate pyruvate lyase 
Protein accessionYP_002124385 
Protein GI196154896 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTA ATGCCACTTT TCCAGTGGGT TTGGCGGTTA ACTGGCAAGC ACCTTCTGGC 
ATCACAATTC CTAATGCGCA GCTGAAAAAC TGGCTGCTTG ATACCGGTTC TTTAACTGCG
CGGGTGCAGT CTTTAAGTAA TCACTTCTCT TTAGAGCTAC TAGGCCAGCA TACGCAAATA
CCCCACGATA ACGAACTATC GTTACTACAC GCTAACGGTG AAACCAGCTA TCAAGCCCGA
GAAATTTTGC TATGTGGCGA TCATCAGCCG TGGGTGTTTG CCCGTTCTAT TATTCCTCAA
GCGTTTGTAG ATAGTGAGCT TTCAGGTCTG GGTCGAGAGC CTTTAGGTAA AAGATTGTTT
AACGACACTA GGTTTACACG GTCAGCATTT CAATTATGTA CTATGCCCGC CTCTCAATTT
GGTATGGGCG GCAACCAAAC CTTGTGGGGA AGGCGTTCGT TGTTTACGTT AGATAATTAC
AGCATGATAG TGGCAGAAGT TTTTCTTCCT GCATCTCCTG CGTATGGCGA AAGTGTCACA
AGTAAAGTAG AAAGCGAAAA ACAGTTATGA
 
Protein sequence
MSFNATFPVG LAVNWQAPSG ITIPNAQLKN WLLDTGSLTA RVQSLSNHFS LELLGQHTQI 
PHDNELSLLH ANGETSYQAR EILLCGDHQP WVFARSIIPQ AFVDSELSGL GREPLGKRLF
NDTRFTRSAF QLCTMPASQF GMGGNQTLWG RRSLFTLDNY SMIVAEVFLP ASPAYGESVT
SKVESEKQL