Gene M446_6379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6379 
Symbol 
ID6133424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp7005439 
End bp7006521 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content77% 
IMG OID641646473 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001773077 
Protein GI170744422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.217095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCCCG ATTCCTCCGC CCCCGCGCCC GGCCAGCTCC GCTTCGAGTT CGTCACCAAG 
CGCTTCGGAC CGATCCCGGC GGTCGAGGAG GTCAGCCTCG ACCTCGCGGC GGGCGAGTTC
TTCTGCCTGC TCGGCCCGTC GGGCTGCGGC AAGTCCACGC TGCTGCGCAT GCTCGCGGGC
TTCGAGGCGC CGACGCGGGG GCGCATCCTG CTCGACGGGC AGGACCTCAC CGGCGTGCCG
CCGCATCGCC GGCCGGTCAA CATGATGTTC CAGTCCTACG CGCTGTTCCC GCATCTCAGC
GTCGCCGACA ACGTCGCCTA CGGCCTGCGC CGGGAGGGGC TCGGCCGGCG CGAGATCGCC
GGGCGGGTCG CCGAGATGCT GCGGCTGGTC CAGCTCGACG GGTTCGAGGC GCGCCGGCCC
GACCGCCTCT CGGGCGGCCA GCGCCAGCGG GTCGCCCTCG CCCGGGCCCT CGCCAAGCGC
CCGCGCGTGC TCCTCCTCGA CGAGCCCCTC GGGGCCCTCG ACCGCACCCT GCGCGAGCAG
ACCCAGGGCG AGTTGCGGGC GATCCAGCGC CGGCTGCGCA CGACCTTCGT GGTCGTCACC
CACGACCCGC CGGAGGCGAT GGTGCTCGCC GACCGGATCG GCGTGATGGA TCGCGGCCGC
CTCGTCCAGG TCGGGCCGGC CGCGGACCTC TACGAGCGCC CCGCCACCCG CTACGTCGCC
GGGCTCCTCG GCGACGTGAA CCTGATCGAG GGCCGGCTCG GCCCCGGCGG GCCGGGCCCG
CGCCGGCTCG ACACGCCGCT CGGCCCGCTC GCCGGCACCG ACCATCACGG GGCCGGGCCG
GAGGGGGCCG CGGCCGCGCT GGCGCTGCGC CCCGAGCGCG TCGTCCTGCG CCCGGACGGG
GAGGGGATCC CCGCCACCCT CACGGACGCG ACCTACCTGG GCGAGAAGAT CGTCTACCGG
GTGCGGCTCG GCGACGGGCG GGAATGGCGG GCCGCGCTGC CGGCGGGGGC ACCGGGCTTG
GCCCCGGGCC TCGCGGTGCG GCTCGGCTTC GCGCCCGAGG CCGCCGCCCT GGTGCCCGCG
TGA
 
Protein sequence
MQPDSSAPAP GQLRFEFVTK RFGPIPAVEE VSLDLAAGEF FCLLGPSGCG KSTLLRMLAG 
FEAPTRGRIL LDGQDLTGVP PHRRPVNMMF QSYALFPHLS VADNVAYGLR REGLGRREIA
GRVAEMLRLV QLDGFEARRP DRLSGGQRQR VALARALAKR PRVLLLDEPL GALDRTLREQ
TQGELRAIQR RLRTTFVVVT HDPPEAMVLA DRIGVMDRGR LVQVGPAADL YERPATRYVA
GLLGDVNLIE GRLGPGGPGP RRLDTPLGPL AGTDHHGAGP EGAAAALALR PERVVLRPDG
EGIPATLTDA TYLGEKIVYR VRLGDGREWR AALPAGAPGL APGLAVRLGF APEAAALVPA