| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6283 |
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| Symbol | lysK |
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| ID | 6129747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 6903469 |
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| End bp | 6905172 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641646379 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001772983 |
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| Protein GI | 170744328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1384] Lysyl-tRNA synthetase (class I) |
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| TIGRFAM ID | [TIGR00467] lysyl-tRNA synthetase, archaeal and spirochete |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.375392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT CGCTCCGCAT CGACCCCGCC CTCCTCGACG CCGCCGCGAC CTCCGCGGCC
TGGCCCTTCG AGGAAGCGCG CAAGCTCGTC GCCCGGCTGG AGCGGAACCC GAAGGCCGAG
CTGCTGTTCG AGACCGGCTA CGGCCCCTCG GGCCTGCCGC ATATCGGCAC GTTCGGGGAG
GTCGCCCGCA CCTCGATGGT CCGCCACGCC TTCCGGCTGC TGACGCGGGA CGCGGTGCCG
ACCCGGCTCA TCGCCTTCTC GGACGACATG GACGGGCTGC GCAAGGTGCC GGACAACGTG
CCGAACCGGG CCCTCCTGGC CGAGAGCCTC AACAAGCCCC TCACCGCCGT GCCGGATCCC
TTCGGCACCC ACGACAGTTT CGGCGCGCAC AACAACGCCG AGCTGCGCCG CTTCCTCGAT
TCCTTCGGCT TCGACTACGA GTTCCTCTCG GCCACGGAAT GCTACCGGGC GGGGGTGTTC
GACGCGGCGC TCCTGCGCGT GCTGGAGCGC TACGACGCCG TCATGGCGGT GATGCTGCCC
TCGCTGCGGG CGGAGCGCTC GGCCTCCTAC TCGCCCTTCC TGCCGCTGCA CCCGGTCACC
GGCCACGTCA TGCAGGTGCC GATCGACGAG GTGAAGGTCG CCGCCGGCAC GATCGTCTGG
CGCGACCCGG CGACGGGCGA GCGCTACGAG ACCCCGGTGA CCGGCGGCCA CGCCAAGCTG
CAGTGGAAGC CCGACTGGGC CATGCGCTGG GTCGCGCTCG GGGTCGATTA CGAGATGGCC
GGCAAGGACC TGATCGACTC GGTGAAGCTG TCGAGCCAGA TCGCCCGCGT GCTCGGGGGC
GAGCCGCCCG AGGGCTTCAA CTACGAGCTC TTCCTGGACG AGAAGGGCCA GAAGATCTCG
AAGTCGAAGG GCAACGGCCT CACCATCGAC GAGTGGCTGG CCTACGGCAC GCCCGAGAGC
CTCGCGCTGT TCATGTACAA CAAGCCGCGG GAGGCCAAGC GCCTGCACTT CGACGTGATC
CCGCGCCACG TCGACGACTA CCTGTCCTTC CTGGAGAAGT TTCCCGGCCA GGAGCCGAAG
CTGCAGCTCG GCAACCCGGT CTGGCACATC CATGCGGGCG CGCCGCCGGC GCCGGAACTG
GCGGCGGGCG GCGGCGCCAT CACCTTCGCG ATGCTGCTCA ACCTGGTGGC GGTGGCGAAT
ACCGAGGATC CGGCGGTGCT GTGGGGCTTC ATCCGCCGCT ACGCGCCGGA GGCCTCGCCG
CGGACGCAGC CGCGCCTCGA CCGGCTCGTC CACCACGCGG TGCGCTACTT CCGCGACTTC
GTGCGGCCGC AGAAGCAGTA CCGGGTGCCC GACGCCCAGG CCGGGGCGGC CCTCGCCGAC
CTGTCGGCGA CCCTGGCGGA GCACGAGGGC TCGACCGATC CCGAGGCCCT GCAGGCCTTG
GTCTACGAGG TCGGGCGGCG CCACTACCCG GACCTGTCCG GCAAGGCCAA GAGCCCGGAC
GGGCGCCCGG GCGTGGCGCA GGCGTGGTTC ACCACGCTCT ACGCCACCCT GCTCGGCGAG
GCGCGCGGAC CCCGCTTCGG CTCCTTCGTG GCGCTCTACG GCGTGGCGGA GACCCGGGCC
CTGATCGCCC GCGCCCTCTC GGGCGACCTC GCCGCCGAGC ACGAGGCCTT CCTGGAGAGC
CGGGCGCCCA AGGCGGCGGA GTAG
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| Protein sequence | MPASLRIDPA LLDAAATSAA WPFEEARKLV ARLERNPKAE LLFETGYGPS GLPHIGTFGE
VARTSMVRHA FRLLTRDAVP TRLIAFSDDM DGLRKVPDNV PNRALLAESL NKPLTAVPDP
FGTHDSFGAH NNAELRRFLD SFGFDYEFLS ATECYRAGVF DAALLRVLER YDAVMAVMLP
SLRAERSASY SPFLPLHPVT GHVMQVPIDE VKVAAGTIVW RDPATGERYE TPVTGGHAKL
QWKPDWAMRW VALGVDYEMA GKDLIDSVKL SSQIARVLGG EPPEGFNYEL FLDEKGQKIS
KSKGNGLTID EWLAYGTPES LALFMYNKPR EAKRLHFDVI PRHVDDYLSF LEKFPGQEPK
LQLGNPVWHI HAGAPPAPEL AAGGGAITFA MLLNLVAVAN TEDPAVLWGF IRRYAPEASP
RTQPRLDRLV HHAVRYFRDF VRPQKQYRVP DAQAGAALAD LSATLAEHEG STDPEALQAL
VYEVGRRHYP DLSGKAKSPD GRPGVAQAWF TTLYATLLGE ARGPRFGSFV ALYGVAETRA
LIARALSGDL AAEHEAFLES RAPKAAE
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