Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_6023 |
Symbol | |
ID | 6135923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 6608533 |
End bp | 6610431 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641646122 |
Product | potassium efflux system protein |
Protein accession | YP_001772734 |
Protein GI | 170744079 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.158915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0391032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAGTG CCGCCGACCA CGCCAGCTTC CTGCCGCCGG TCCTCACCTT CCTGTCGGCC GCCGTGGTCG GCGTGCCGAT CGTGCGCCTG CTCGGCCAGA GCGCGGTTCT GGGCTACCTC CTGGCCGGGG TGGTGATCGG GCCCTCCGGG TTCTCGCTGA TCCCGGAGGC CGAGACGGCG CGCAGCGTCT CGGAGCTCGG GGTGGTGCTG CTGCTGTTCA TCGTCGGGCT CGAACTGGAG CTCTCGCGGC TGATCTCGAT GCGCCGCGAC ATCCTGGGCC TCGGCACGCT CCAGCTCGTC GCCTGCGCGG CGGCGCTCGG GGGACTCGGC ATCCTGGGCG GCCTCACCCC GGCCGCCGCC GGGGTGGTCG GCACGGCGCT CGCCCTCTCG GCGACGGCGG TCGCCCTGCA ATTGCTGGAG GAACGGCGCG ACCTCGCCGC CCCCTACGGC CAGCGCGCCT TCGCGGTGCT GCTGTTCCAG GACCTCTCGG TGGTGGCGAT CCTGGCCCTG TTGCCGCTGC TCGCCTCGAC CGGCACGGCG GCGAGCGGCA ACCCGCTCGG CGAGGCGCTG CGCGCGGCGG GCTCGGCGGT GGCGGCGATC CTGGCGGCGG TGCTGGTCGG ACGCTACGGC CTCAACCGGT TCTTCCGGCT GCTGGCCGCC AGCGGCGCCC GCGAGGTGAT GACCGCCGCC GCCCTCTTGG TCGTGCTCGG GACCGCGCTG CTGATGGAGC ATGTCGGCCT CTCGATGGCG ATGGGCGCCT TCCTGGCCGG GCTGCTGCTC GCCGAATCGA ACTTCCGCCA CCAGCTCGAG GCCGATATCG AGCCGTTCCG CGGCATGCTG CTCGGCCTCT TCTTCATGAG CGTCGGCATG TCGATCGACG TGGCGCTGGT GCGGGAGCAC TGGCTCGGGC TCTCGGCCGC CACGGTCTCG GCGATCCTGC TCAAGACCGC GGTCGTGGCG GCCCTGTTCC GCCTGTTCGG CTCGCCCTGG CTCGACGCCC TGCGGGGCGC CGCCGTGCTC GCGCCGGCGG GGGAATTCGC CTTCGTGCTC CTGCCGATGG CGGGCGAGCT CGGGATCGTG GACGGGGCGG CGGGGCGGCT CGCCATCGCG CTCGCGGCGC TCACCATGCT GGTGGGGCCG CTCGCCGCCA AGGGGCTCGA CGGGCTGCTC GCGCGGCGGC GCACCGGCGC CCTCGAACCG GCCTACGACC AGATCGAGAG CACCGACGCC CGCGTCCTCG TGGTCGGCTT CGGCCGCTTC GGCCAGATCC TCAACCAGGT GCTGCTGGCG CAGGGGATCA GCGTCACGGT GATCGACAAG GACGTGGAGC AGATCCGCAG CGCCGCCCGC TTCGGCTTCC GGGTCTATTA CGGCGACGGC ACCCGCCTCG ACGTGCTGCG GGCGGCCGGG GCCGGGCGCG CCGAGGTGAT CTGCATCTGC ATCGACGAGG CCGAGGAGAC CCTCAAGATC ATCGACCTTG TCCACGCGGA ATTCCCCGCC GCCCGCACCT ACGTGCGGGT CTTCGACCGG GTCCAGGCGA TCGAGGCGAT GAACCGGGAC GTCGACTTCC TGATCCGCGA GACGGTCGAG TCGGCGCTGG CCTTCGGGCG GGCCACCCTG GAGGCGCTCG GCGTGCCGGC CCAGGAGGCG GCCGGCATCG CCGACGACGT GCGCAAGCGC GACGTCGCCC GGCTCGTCCT GCAGCAGGCC GGCGAGCCCC TCGACCGCAC CGACCCGGTG CGCGGCCTCG TGCGCATCAA GCCCGAGCCC CTGACCGCGC CCCAGCGCGC CTCCCGGGCG CTGACCCAGG AGACGCGGGA CATCCTCGCC AAGGAGCGGC CGGCGCCGCC CGAGCCCGCC CCCGAGGCCA GCCCGGAGCC GGTCTCCGAT GAGGCCTGA
|
Protein sequence | MASAADHASF LPPVLTFLSA AVVGVPIVRL LGQSAVLGYL LAGVVIGPSG FSLIPEAETA RSVSELGVVL LLFIVGLELE LSRLISMRRD ILGLGTLQLV ACAAALGGLG ILGGLTPAAA GVVGTALALS ATAVALQLLE ERRDLAAPYG QRAFAVLLFQ DLSVVAILAL LPLLASTGTA ASGNPLGEAL RAAGSAVAAI LAAVLVGRYG LNRFFRLLAA SGAREVMTAA ALLVVLGTAL LMEHVGLSMA MGAFLAGLLL AESNFRHQLE ADIEPFRGML LGLFFMSVGM SIDVALVREH WLGLSAATVS AILLKTAVVA ALFRLFGSPW LDALRGAAVL APAGEFAFVL LPMAGELGIV DGAAGRLAIA LAALTMLVGP LAAKGLDGLL ARRRTGALEP AYDQIESTDA RVLVVGFGRF GQILNQVLLA QGISVTVIDK DVEQIRSAAR FGFRVYYGDG TRLDVLRAAG AGRAEVICIC IDEAEETLKI IDLVHAEFPA ARTYVRVFDR VQAIEAMNRD VDFLIRETVE SALAFGRATL EALGVPAQEA AGIADDVRKR DVARLVLQQA GEPLDRTDPV RGLVRIKPEP LTAPQRASRA LTQETRDILA KERPAPPEPA PEASPEPVSD EA
|
| |