| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5896 |
|---|
| Symbol | |
|---|
| ID | 6133134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 6484433 |
|---|
| End bp | 6485473 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641646003 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
|---|
| Protein accession | YP_001772615 |
|---|
| Protein GI | 170743960 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.766336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCG GGAGCAAGGC ACGCCGCGAG GACAAGACCG CGAGCCCGCC CCCCGCGAAC
GCGCCGCACT TCACGCGCGA CGAGGACGTG CACGCCTACA GCGAGATGCT GCTGATCCGC
CGCTTCGAGG AGAAGGCCGG CCAGCTCTAC GGGATGGGCC TGATCGGCGG CTTCTGCCAC
CTCTATATCG GCCAGGAGGC CGTGGTGATC GGGGTCCAGA TGGCCTCGAA GGAGGGCGAC
CAGGTCATCA CCGGCTACCG CGACCACGGC CACATGCTGG CCTGCGGCAT GGACCCCAAG
GGCGTGATGG CGGAACTGAC CGGGCGGCGG GGCGGCTATT CCCGCGGCAA GGGCGGCTCC
ATGCACATGT TCTCCCGCGA GAAGAACTTC TACGGCGGCC ACGGCATCGT CGGGGCCCAG
GTCTCCCTCG GCACCGGTCT CGGCTTCGCC AACAAGTACC GCGGCGACGG GGCGGTCAGC
CTGACCTACA TGGGCGACGG CGCCGCCAAC CAGGGCCAGG TCTACGAGAG CTTCAACATG
GCGGAGCTGT GGAAGCTGCC CGTCGTCTAC GTGATCGAGA ACAACCGCTA CGCCATGGGC
ACCTCGGTGA CCCGGGCCTC GGCGCAGACG GACTTCTCGA AGCGCGGCGT CTCCTTCGGC
ATCCCGGGCG AGCAGGTCGA CGGCATGGAC GTGCGCGCCG TGCGCGACGC CGCCGCCCGG
GCCATCGCGC ATGCCCGGTC GGGGGAGGGG CCCTACATCC TGGAGATGCA GACCTACCGC
TACCGCGGCC ACTCGATGTC CGACCCGGCC AAGTACCGGA CCAAGGACGA GGTCGCGCGG
ATGCGCGAGG AATCCGACCC GATCGAGCAG GTCCGCAAGC GGCTGCTCGG CCCGCACAAG
GTCCCGGAGA ACGAGATCAA GGCGATCGAC GCCCAGGTGC GGGAGATCGT CAACGAGGCG
GCGGACTTCG CCACCAACGA CCCCGAGCCC GATCCCGCCG AGCTGTGGAC CGACGTCCTG
CTCGAGCCCG CCCGCGCCTG A
|
|---|
| Protein sequence | MEAGSKARRE DKTASPPPAN APHFTRDEDV HAYSEMLLIR RFEEKAGQLY GMGLIGGFCH
LYIGQEAVVI GVQMASKEGD QVITGYRDHG HMLACGMDPK GVMAELTGRR GGYSRGKGGS
MHMFSREKNF YGGHGIVGAQ VSLGTGLGFA NKYRGDGAVS LTYMGDGAAN QGQVYESFNM
AELWKLPVVY VIENNRYAMG TSVTRASAQT DFSKRGVSFG IPGEQVDGMD VRAVRDAAAR
AIAHARSGEG PYILEMQTYR YRGHSMSDPA KYRTKDEVAR MREESDPIEQ VRKRLLGPHK
VPENEIKAID AQVREIVNEA ADFATNDPEP DPAELWTDVL LEPARA
|
|---|
| |