Gene M446_5842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5842 
Symbol 
ID6130088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6421308 
End bp6422681 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content76% 
IMG OID641645949 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001772563 
Protein GI170743908 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0989467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.250869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAC CGCCCGCCCG ATTCGAGACC TGCGCCACGC CCGCGGCGGC CCTTCGGCCG 
GCCCCGCGCC GGGCGGCGAC GCGTCTCGGC CTCGCGGCGG CCCGCCTCGT GGGAGCCTGC
CTGGTCGGGA TCTGCCTGTT CGGGACCTGC CTGGTCGGGA CCTGCCTGGT CGGGGCTTGG
CTCGGCCTCG CGCCCGCGGC CTGGGCGGGC GCGCTGCCGG CGGTCGCGAT CGCGGCCGAG
CTCTCGCCCG CGCCGGAGGG CGGCACCCGG CTCAGCGTCG TGCTGTCGCG CCCCGTCGAG
GCCAAGGCCT TCGTGATGGA ACGGCCCGAC CGCGCCATCA TCGACCTGCC CGAGGTGAAC
TTCCAGCTCC CGCTGGAGAC CGGCCGGCGG CGGGAGGGCC TCGTCGCCTC CTTCCGCTAC
GGCCTGTTCG CGCCCGGCCG CTCGCGCATC GTCATCGACC TCGCCCAGAC CGCCACGGTG
GCCAGGGTCG CGACCAGCTC CCGCAAGCGC GACGGGGCGA CCTTGCTCAC CATCGACCTC
GCGCGCGCCG ACCGCGACGC CTTCCGGCGC GCCGCCGTCG CCCCGGCGCC GCCCGCCGCC
CCGAAGGCCG TGCCGGCGAG CGCGGGCGAC ACCCGCCCCC TCGTCATCAT CGATGCCGGC
CACGGCGGCA CGGATCCGGG GGCGATCGCC GCGAACGGCG CCTTCGAGAA GGACATCGTC
TTCGGCGTCG CCCGGGACCT CGCGCGGCGC CTGGAGCAGG GCGGGCGGGT GCGGGTGCGC
ATGACCCGCG AGAGCGACGT CTTCGTGCCG CTCGGGGAGC GCGTCCGCAT CGCCCGCGAC
GCGAGGGCGG ATCTCTTCAT CTCGATCCAC GCGGATTCGA TCTCGGCCGC CCCGCAGGTG
CGCGGGGCCA CGATCTACAC CGGCTCCGAG AAGGCGACCG ACGCGGAATC GGCCCGCCTC
GCCGACCGCG AGAACAAGGC CGACCAAGCC GCCGGCGCCG ACAGCGCCGA GGGGCCGGGC
GACGTCGCCG ACATCCTGCA GGAACTCACC CTGCGCGAGA CCCGCGGCTT CTCGGCGCGC
TTCGCGCAAG GCCTGCTCGG CCAGCTCGAC CGGGTGATGG AGATGAGCAG CAAGCCCCAC
CGCGAGGCGG GATTCCGGGT GCTGCGCTCG CCGGACGTGC CCTCGGTGCT GGTCGAACTC
GGCTACCTGT CGAGCAAGCA CGACCTCGAC CTCCTGCTCT CGGACGCGTG GCGGGCCAAG
GTCACGACCC GCATGGCGGA GGCGATCGAG GCCTTCTTCG CCGCCCGCCC GGCCCCGGTC
CCGGCCGTGG TCGCCCGCAG CTCGGCGCTG ACCACCGCCC CAGTTTCACC ATAG
 
Protein sequence
MPRPPARFET CATPAAALRP APRRAATRLG LAAARLVGAC LVGICLFGTC LVGTCLVGAW 
LGLAPAAWAG ALPAVAIAAE LSPAPEGGTR LSVVLSRPVE AKAFVMERPD RAIIDLPEVN
FQLPLETGRR REGLVASFRY GLFAPGRSRI VIDLAQTATV ARVATSSRKR DGATLLTIDL
ARADRDAFRR AAVAPAPPAA PKAVPASAGD TRPLVIIDAG HGGTDPGAIA ANGAFEKDIV
FGVARDLARR LEQGGRVRVR MTRESDVFVP LGERVRIARD ARADLFISIH ADSISAAPQV
RGATIYTGSE KATDAESARL ADRENKADQA AGADSAEGPG DVADILQELT LRETRGFSAR
FAQGLLGQLD RVMEMSSKPH REAGFRVLRS PDVPSVLVEL GYLSSKHDLD LLLSDAWRAK
VTTRMAEAIE AFFAARPAPV PAVVARSSAL TTAPVSP