Gene M446_5536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5536 
Symbol 
ID6130119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6072504 
End bp6073292 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content59% 
IMG OID641645668 
Productshort chain dehydrogenase 
Protein accessionYP_001772283 
Protein GI170743628 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGG TCGAACGTCT AAAGCCCTTG CCCGGCCTGA AAGTTTTGGT GACGGGCGGA 
GCTGCAGGGA TTGGTGCCAC CATCGCAAAG GCGTTCGCTG AGATCGGCGC GCGCGTGTAT
GTCTGCGACA TCGACCCTTC GGCGGTCGAG GACATCAAAA CGGCCAACCC AGCAATTGGT
GCCGCTGTCG CAGACGTGGC CGAAAGACAG AGTGTCGATC GCTTTGTCGA CGCTGCTGCC
GATGCGCTCG GGGGGTTGGA TGTCATCGTC AACAACGCCG GGATCGCCGG CCCTACCGGA
GCTATCGAGG CCCTTGAGCC GGAGGACTGG GAGCGAACAG TCTCGACCAA TCTGAACAGC
CAGTTCTACG TTTTGCGCCG CGCCGTCCCC ATCCTGAAAG GCTCTCAGGC GCCGAGCATC
GTTGCTATAT CGTCGGTGGC TGGACGTCTC GGGTACCCGT TCAGGACGCC GTATGCCTCG
ACCAAATGGG CGATTGCAGG GTTAGTTAAG TCGCTCGCCA TTGAGCTTGG CCGGGAGAAT
GTGCGGGTCA ACGCAGTTCT ACCGGGCCTC GTTGCTGGAC CGCGGATGGA TCGCGTGATC
GACGCGCGGG CGCAGGCGCT TGGGGTCAGC TTTGAAGTAA TGAAAGGCGA ATACCTCAAA
AAAATCTCGC TTGGCAGAAT GGTGACCGAA GATGACATCG CGGCGATGGC GTTGTTCCTG
TGTTCGCCAG CGGCAGTAAA CATTACCGGT CAGATCATCA GTGTTGATGG CAATGTCGAG
TATCTGTAA
 
Protein sequence
MSTVERLKPL PGLKVLVTGG AAGIGATIAK AFAEIGARVY VCDIDPSAVE DIKTANPAIG 
AAVADVAERQ SVDRFVDAAA DALGGLDVIV NNAGIAGPTG AIEALEPEDW ERTVSTNLNS
QFYVLRRAVP ILKGSQAPSI VAISSVAGRL GYPFRTPYAS TKWAIAGLVK SLAIELGREN
VRVNAVLPGL VAGPRMDRVI DARAQALGVS FEVMKGEYLK KISLGRMVTE DDIAAMALFL
CSPAAVNITG QIISVDGNVE YL