Gene M446_5529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5529 
Symbol 
ID6129949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6065449 
End bp6066396 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID641645662 
ProductLysR family transcriptional regulator 
Protein accessionYP_001772277 
Protein GI170743622 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTC TGCGCCGGAT GATCCCGTCC AGCCATGCGT TGTTCGTGTT CGAGGCCGTG 
GCGCGCAACG TCAGCTTCAC CCAGGCGGCG ACCGAGCTGA ACGTGACCCA GCCGGCGGTT
AGCAAGGCAA TCTCGCAGCT CGAGCGCCAT CTCGGCGTGC GGCTCTTCGA CCGTTCCAGC
GACGGCCTCG CGCTGACCGA GGAGGGTAGC CTTCTCTTCC AGCGCGTGAC GGACGGATTC
CAGGGCATCG AGGCGGCGCT GCGGGAGATC GACATCAGGC GCACCGGAAC CGACACTGTC
ACGCTGTCGG TCTCATCGGC CTTCGCCACG CACTGGCTGA TGCCCCGCAT CAACACCCTT
CAGGAAGCGT TCCCGGCGGT CGACTTCCGC TTCCAGCTCA TCCCCGGGGC GCTCGGCGGC
CCCGTCGACA GCGTCGACCT CGGGATGCGC TTCGTGGAGG GGCCCGACCG CGACCACGAG
GCGCTGTTCC TGATGAACGA GGTGATGCTC CCGGTCTGCA GCCCGACCTA TCTCGCCGGC
AGCACGGCCG GCGGCGGCCG GACCACCATG GTCAACCTCA CGGCGACTTC GCCGGCGCGC
ACCCGCGAGG TCGATCCCGG GCCGGGCTGG ACCGGCACCC GCGCTTCCCT GAACTTCTCC
GACTACGCGG TGGTGGTCCA GGCCGCGCTC CTCGGCCAGG GCGTGGCGCT CGGCTGGCTG
AACGTGGTGT CGCACTGGCT CGCAACCGGC GACCTCGTGC CGGCGAGCGA ACGACTCACG
CGGACCGCGC GCGTCTGCCA ACTTGTCCAC CTGCGCGCGC GTCCACTCCG CGCGTCGGTG
GCCGCGGTGC GGGATTGGAT TATCGCGGAG ATGCGGGCCG ACATCGCCAA GGCCGACGCG
CGCTACCCCG ACCTCGGCCT GGAGCGGGCG TGTTTCGGGG CGCCATAA
 
Protein sequence
MPPLRRMIPS SHALFVFEAV ARNVSFTQAA TELNVTQPAV SKAISQLERH LGVRLFDRSS 
DGLALTEEGS LLFQRVTDGF QGIEAALREI DIRRTGTDTV TLSVSSAFAT HWLMPRINTL
QEAFPAVDFR FQLIPGALGG PVDSVDLGMR FVEGPDRDHE ALFLMNEVML PVCSPTYLAG
STAGGGRTTM VNLTATSPAR TREVDPGPGW TGTRASLNFS DYAVVVQAAL LGQGVALGWL
NVVSHWLATG DLVPASERLT RTARVCQLVH LRARPLRASV AAVRDWIIAE MRADIAKADA
RYPDLGLERA CFGAP