Gene M446_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5485 
Symbol 
ID6135117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6018601 
End bp6019467 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID641645619 
Productaminotransferase 
Protein accessionYP_001772235 
Protein GI170743580 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.787347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0338469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGA CGACTGTGTC CGAGACAACC TGGACCTTCT TCGAGGATCA GTGGCATCCG 
GGCAATGTCC GGATGATGGG CCCGCGCACG CACGGCGCGT GGCTCGGCTC CACCGTGTTC
GACGGCGCCC GCTCCTTCGA GGGGGTGACC CCCGACCTCG ACCTGCACCT CGCCCGGGTC
AACCGCTCCG CGACCGCCAT GGGCCTGAAG CCGGTCGTCG CCGTCGAGAC CTGGCGCGAC
CTGGTGCGCG AGGGCTTGGC CCGGTTCGAC GCGCGCACGC CCCTCTACAT CCGGCCGATG
TACTGGGCGG AGAGCGGCTT CGCGGGCGGC GTGCGCTTCG ATCCGGAATC CACCAACTGG
TGTCTGTGCC TCTACGAGGC GCCGATGCCG GTGCCGGGGC GGCTGTCGGT GACGCTCTCG
CCCTTCCGCC GGCCGACCGC CGAGACGGCG CCGGTCGAGG CCAAGGCCGG CTGCCTCTAC
CCGAACGGCG CGCGGGCGCT GGCGGAGGCC CAGAGCCGCG GCTTCGGCAA TTGCCTGGTG
CGCGACGCGC TCGGCAACAT CGCGGAATTC GCCAATGCCA ACGCCTTCCT GGTGCGGGAC
GGCGTCGTCG CCACGCCGGC GGCGAACGGC ACCTACCTGG CGGGCGTCAC CCGCAACCGC
GTCATCGGCC TGCTGCGCGA GGCCGGCGTG ACGGTGGCCG AGACCACCCT CACGCACGCG
GATTTCGCCG CGGCGGACGA GATCTTCTCG ACCGGCAACT TCTCGAAGGT GATGCCGGTG
ACGGGGATCG ACGGGCGGGA ATTGGAGCCC GGCCCGATCT ACCAGCGGGC GCGGGACCTC
TACTGGGCCT ACGCCCACGG CGGATAG
 
Protein sequence
MTETTVSETT WTFFEDQWHP GNVRMMGPRT HGAWLGSTVF DGARSFEGVT PDLDLHLARV 
NRSATAMGLK PVVAVETWRD LVREGLARFD ARTPLYIRPM YWAESGFAGG VRFDPESTNW
CLCLYEAPMP VPGRLSVTLS PFRRPTAETA PVEAKAGCLY PNGARALAEA QSRGFGNCLV
RDALGNIAEF ANANAFLVRD GVVATPAANG TYLAGVTRNR VIGLLREAGV TVAETTLTHA
DFAAADEIFS TGNFSKVMPV TGIDGRELEP GPIYQRARDL YWAYAHGG