| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5459 |
|---|
| Symbol | |
|---|
| ID | 6133642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 5991500 |
|---|
| End bp | 5992669 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641645593 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_001772209 |
|---|
| Protein GI | 170743554 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.243673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.330218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAAGG ACGCGCCCGC CCGGGCCTCG CTGCCGCTGC TCGTCGCCGT GACGATGACC
GGGACCGTGG CGCTGCACAT CTTCGTGCCG GTGCTCCCGG CCGCGGCGGC GGATCTCGGC
ACCTCGCCGG TCGTGGCGCA GCTGACGATC ACCCTCTACC TCGTCGGCCT CGCCTGCGGA
CAACTCGTCT ACGGCCCCCT CTCCGACCGC TACGGCCGCC GCCCGGTGCT GATCGCCGGG
ATGGCGCTCT ACCTCGCGGG GCTGCTCCTG GCGATCCCGG CGCGCAGCAT CGGCGTCCTG
GTGGCGGCGC GGGTGCTGCA ATCGCTCGGG GCCTGCGGCG CCCTCGTGCT CGGCCGCGCC
ATGGTGCGCG ACGTCTCGAC CGCGGAGGAC GCCACGCGCA AGCTCGCGCT CCTCACCATG
GCGATGACCC TGACGCCCGC CCTCGCGCCG GCGATCGGCG GCGTCGTGGG CGGGGCGCTC
GGCTGGCGGG CGGTGTTCGT GCTCCTCGCC GCCCTGGTCG CCGTCCTCGG CGCCCTCGTG
CTGCGCGGCC TGCCGGAGAC GAACCGGCAC CCGGTCGCCC TGCCGGGCCT CTCGGCCGTC
GCCGCCTCCT ACCTGCGCCT CCTCGGGGCG CCGGTCTACC GCGCCTACGT GGTGGCGGGC
GCCTGCGCGG GGACGAGCCT CTACGCCTTC CTGGCGGTGG CGCCCTTCCT GCTCGGCGAG
CGGCTGGGCC GGACGCCGCA GCAGGTCGGG TTCGACTGCC TGCTCGTCGT CGCCGGCATG
GTGGCGGGGG CGTGGATCGC CGGCCGCCTC GCCGGGCGGA TGCCGATCCG GCGCGCCGCG
CGCCTCGGCA ACGGCCTGTG CTTCGCCGGG GCGCTGGCGC TGCTCGCCGT CGATCGCGGC
GGCGCGCTCG GCGTGGCGAC CCTGATCCTG CCCCTCGTCC TCTACGCGGT CGGGATCGGG
CTCCTCGGCC CGAACGCCGT GGCGGGGCTG ATGAATGTCG ACCCGCACGC CGCCGGGGCC
GCGTCGAGCC TCTACGGCTT CCTGCAGATG ACCCTCGGGG CCGCGTTCAC GGTCTCGGTC
GCGGCGTGGC ACGACGGCAC CGCGACGCCG GTCGCCGTGA CCCTGCTCGC GGCGGCCAGC
CTGGCGGCCC TGGCCCTCCG GCGGGGCTGA
|
|---|
| Protein sequence | MTKDAPARAS LPLLVAVTMT GTVALHIFVP VLPAAAADLG TSPVVAQLTI TLYLVGLACG
QLVYGPLSDR YGRRPVLIAG MALYLAGLLL AIPARSIGVL VAARVLQSLG ACGALVLGRA
MVRDVSTAED ATRKLALLTM AMTLTPALAP AIGGVVGGAL GWRAVFVLLA ALVAVLGALV
LRGLPETNRH PVALPGLSAV AASYLRLLGA PVYRAYVVAG ACAGTSLYAF LAVAPFLLGE
RLGRTPQQVG FDCLLVVAGM VAGAWIAGRL AGRMPIRRAA RLGNGLCFAG ALALLAVDRG
GALGVATLIL PLVLYAVGIG LLGPNAVAGL MNVDPHAAGA ASSLYGFLQM TLGAAFTVSV
AAWHDGTATP VAVTLLAAAS LAALALRRG
|
|---|
| |