Gene M446_5456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5456 
Symbol 
ID6133639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5988004 
End bp5988870 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content74% 
IMG OID641645590 
Productformyl transferase domain-containing protein 
Protein accessionYP_001772206 
Protein GI170743551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0931925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCG CCTTCGCGGG GATCGACTTT CTCGGCGGCG TCTTCGAGGC CCTGGCGGGG 
GCCGGCTGGC AGCCGATCAA GCTCTTCACC CGGCCCTGCG ACGGCATCTA CGACTTCAAC
GACAGCGTGG TGACGCTGGC GCGCCGCCAC CGGGTGCCGA TCCAGCTCTC GCGGGTGCGG
CCGGCGGATC TCGACGCGCT GACCCAGGAG CACGGCCGCG ACTGGGCGCT CGTCGTCGCG
GGCTATCCCT GGCTGATCAC CGGCTGGCCG GGCCGGGTGC GCTACGCGCT CAACTTCCAC
CCCTCGCCGC TGCCGACCGG CCGCGGCCCC TACCCGCTGT TCAAGGCGAT CCTCGATTCC
TACGAGACCT GGGGCGTCAC CGCCCACGTC CTCGCCGAGG AGGGGTTCGA CACCGGCGAC
ATCCTCGCCC AGGAGCTCTT CCCGCTCTCG CCCGGCGAGA CCCACGAGAC GCTGCTCGCC
CGCTGCCAGA TCGCCGCGAT GCGGCTGGCC GCCGGACCGA TCGCCCGCGA CCTGCCCGCC
CGCTGGCGGG CCCCGGAGCC GCAGGGCGAC GGCTCCTACT GGCCGCGGGT GACGGATGCG
GACCGCACCC TCGATTTCCG CCAGCCCGTC GCCGCGGTGC TGCGCAAGGT GCGGGCCTTC
GGGACGATCG AGACCGTGGC GCGGCTCAAC GACGCCCGGG TCTTCGTGGC GGCGGCCGAC
GGCTGGGTCG AGCCGCACCG CTACGCGCCG GGCGCGATCG TGCACCGCCA CCGCCGCCAC
GTGCTGGTGG CCGCCCGGGA CGGCTTCGTG CAGATCACCC GCTGGAGCAC GCTGCCGCTG
GCGGAGGCCG GCCAGACCGG CCGCTGA
 
Protein sequence
MKFAFAGIDF LGGVFEALAG AGWQPIKLFT RPCDGIYDFN DSVVTLARRH RVPIQLSRVR 
PADLDALTQE HGRDWALVVA GYPWLITGWP GRVRYALNFH PSPLPTGRGP YPLFKAILDS
YETWGVTAHV LAEEGFDTGD ILAQELFPLS PGETHETLLA RCQIAAMRLA AGPIARDLPA
RWRAPEPQGD GSYWPRVTDA DRTLDFRQPV AAVLRKVRAF GTIETVARLN DARVFVAAAD
GWVEPHRYAP GAIVHRHRRH VLVAARDGFV QITRWSTLPL AEAGQTGR