Gene M446_5366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5366 
Symbol 
ID6133288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5895366 
End bp5896058 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID641645496 
ProductHly-III family protein 
Protein accessionYP_001772118 
Protein GI170743463 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.120235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGA CGACCGGACA CGCCGATGAC GGCCGGCCGC CCTCCCTGAA CTGGTCCTAC 
TCGCCCCGGG AATTGCTGGC GGACGGCATC GTCCACGTGA TCGGCGTGAC CTTCGCGGTG
ATCGGGGGGC TCGCCCTGGT GGTCACGGCG GCGCTCGCGC GGCTTCACCC GGGCGAGAAG
CTCTCGGTCG GCGTCTACGC GGCGGGGCTC GTGGCGATGC TGAGCGTCTC GGCGGCCTAC
AACATGTGGC CGCGGGGACG GCGGAAATGG CTGCTGCGCC GGGCCGACCA CGCCACCATC
TTCCTGATGA TCGCCGGCAC CTACACGCCG CTCGTGGCGC TGGTGGGGAG CGGCGGGGTC
GCCTGGGGCC TGCTCGCGGG GATCTGGCTC GTGGCGGTGG TGGGCATGGC GATCAAGGTC
GCCCTGCCGG GCCGGTTCGA CCGGCTCGCG GTGGCGCTCT ACCTCGCCCT CGGCTGGAGC
GGGGTCGCGG CCTACGATTC GGTGATCGGC CAGCTCGTCC CGGACGCCTT CGCGCTGCTC
GCGGGCGGGG GCCTGCTCTA CTCGGCGGGG GTGATCTTCC ACCTCTGGCA CCGGCTGCCG
TTCCAGAACG CCATCTGGCA CGGCTTCGTG CTCGCCGCGG CGGCCTGCCA CTACGGGGCG
GTCTTTCGCA GCATGATGGA GGCGGCGGCC TGA
 
Protein sequence
MRPTTGHADD GRPPSLNWSY SPRELLADGI VHVIGVTFAV IGGLALVVTA ALARLHPGEK 
LSVGVYAAGL VAMLSVSAAY NMWPRGRRKW LLRRADHATI FLMIAGTYTP LVALVGSGGV
AWGLLAGIWL VAVVGMAIKV ALPGRFDRLA VALYLALGWS GVAAYDSVIG QLVPDAFALL
AGGGLLYSAG VIFHLWHRLP FQNAIWHGFV LAAAACHYGA VFRSMMEAAA