Gene M446_5311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5311 
Symbol 
ID6135254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5828622 
End bp5829329 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content75% 
IMG OID641645443 
Productlipoate-protein ligase B 
Protein accessionYP_001772066 
Protein GI170743411 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0319626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAAACG CCCGCCTCTC CGTGCTGCCG CACGCCCTGC CGCCCCCGCC CGGCGCGCCG 
CCCGTCGAGT GGGCGGTGAG CGAGGGCCTC ACCGCTTACC GGGAGGCCGA GGCCGCCATG
GAGGCCCGCG CCGCCGCCAT CGCGCGGGGC GAGGCGCGCG AGCGCGTCTG GCTGGTGGAG
CACCCGCCCC TCTACACGGC CGGCACTTCG GCCAAGGAGG CGGACCTGGT GGCGCCCGAC
CGCTTCCCGG TCCACCGCAC CGGGCGGGGC GGGCAATTCA CCTATCACGG GCCGGGCCAG
CGGGTGGCCT ACGTCATGCT CGACCTCAAC CGGCGCCGGC CCGACCTGCG GCTCTACGTG
GCGGCCCTGG AGACGTGGCT GATCGCCACC CTCGACGCCT TCACGGTGCG GGGCGAGCGG
CGGGAGGACC GCGTCGGCGT CTGGGTGCGC CGGCCCGAGA AGGGGGAGGG GGTCGAGGAC
AAGATCGCGG CGATCGGGAT CCGGGTGCGC CGCTGGGTGA CCTTCCACGG CATCAGCCTC
AACGTCGAGC CGGACCTGAC CCATTTCGAC GGGATCGTGC CCTGCGGGGT GCGGGCGCAC
GGGGTCACGA GCCTCGTCGA TCTCGGCCGC CCGGTGACGA TGCCGGAGGT GGACGCGGTG
CTGCGCGCGC GCTTCGAGGA GGTGTTCGGC GAGACGATCC TCGCCTGA
 
Protein sequence
MVNARLSVLP HALPPPPGAP PVEWAVSEGL TAYREAEAAM EARAAAIARG EARERVWLVE 
HPPLYTAGTS AKEADLVAPD RFPVHRTGRG GQFTYHGPGQ RVAYVMLDLN RRRPDLRLYV
AALETWLIAT LDAFTVRGER REDRVGVWVR RPEKGEGVED KIAAIGIRVR RWVTFHGISL
NVEPDLTHFD GIVPCGVRAH GVTSLVDLGR PVTMPEVDAV LRARFEEVFG ETILA