Gene M446_5290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5290 
Symbol 
ID6130338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5805228 
End bp5807216 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content76% 
IMG OID641645425 
Productsignal transduction histidine kinase 
Protein accessionYP_001772048 
Protein GI170743393 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.249657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCCG GCCATGCCGG TCATCATCCG CGCCGCCCAA GCCTCGCGAC CGGGGCGGTG 
CGGCGGGGAG ACGACGCGGC CCGCGGGTGG GCCGACCGGA CGCGGGTGTG CGAGGAGCGC
GTGGATCGCC TCTCCAGACG GCCGGGGGAC CCGGCGGGGC CGGCCGGACC CGGCGTGAGA
CCAGTGGGGC GCGCCTTGGA CCACAGGCCT GACCAGCAGC CCGACCGGCC GGGGGACGCG
CCGGCCCCGG GCCACACCGG CGACGCGCTC CTGCGGTTCG CCTTCGAGGC GGCCCCCGTC
GGGATCGCCT GCCTGTCCGG CCCGGACGAT CGCCTCGTCG CGGCCAATGC CCGGCTCTGC
GCCCTGCTCG CCGCCGCGCC GGAGGATTTG CTCGGCCGCT GCCTCGCCGA CCTCGTCGAT
GCCGCCGGCG CCCCGGCCGA TCCCGTGTCG GGGGCCGGGA TCGAGCAGTG CTGGCGGCGC
GGCGACGGCG GCACCGTCTG GGTGACGGTG CGGGCCGGCC CGTCGCGGGA CGGGCAGCGG
GTGCTGACCG TCGAGCCGGC GGAGGATCAC GGCGCCGCCG CCCGCGCCGA GCAGACCCGC
CTCGCCCTGG CCTTCTCGGG GCTCGGCGAC TGGAGCTGGA GCCGGGCCAG CGGCCAGATC
ACCCTCTCGG AGCGGGCCGC GGAGATCCTG GGCCTCGCCC CGGGGCCCTC CGTCGCCGCG
GAGACCCTGG AGCCGCGGCT GCACCGGGAC GACCTGGAGC GCGCCCGCGC CCTCGTGCAG
GAGGCCGCGC CCCTCGGCCG GGCCTACGCG GTCGACCTGC GCTACCGCCG CCCCCCGGAC
GGCCAGGAGG TCTGGATCTC GGTCCGCGGC CGCGCCCAGC TCGGCCCGGA CGGGGCGGTC
GTCGGCATGA TCGGCGTCGT CCAGGACGTC ACCGCCCGCG AGGAGGCCCG GCGCGCCCTG
CACGACCGCG AGCAGCGGCT GCGGGTCGCG ACCTCGGTGG CGGCGCTCGG CATCTTCGAG
TGGCACCTCC TCGACGACCA GGCGCTCTGG GAGAACGAGC GCATGTGGGA GATCTTCGGC
CGCCGCCCGC AGGACGGCAC GATCAGCATG ACCGAGTTCT TCCGCGAGGT GATGCACCCG
GAGGACAAGG GGCCGTTCCG GGCCGCGGTC GCGGACGCCC TCCAGGGCGA GGGCGTGCTG
CACGCCACCG GGCGCATCCG CCGGGCGAGC GACGGGACGT GGCGCACGAT CGAGATGGCC
GGGCGCTTCG AGCGCGACAA CCCGGGCGGC CTGCCCCGCC GCCTGATCGG GGTCGTCGCC
GACATCACCG ACCGGCGCCT CGCCGAGGAG CGCCAGACGC TCCTGATCCG CGAACTCCAC
CACCGGGTGA AGAACACCCT CGCCACCGTG CAGGCGATCG TCGGCTCGAC CGCCCGCACC
GCGTCGAGCA TCGAGAGCTT CTACGAGGCC TTCGTCGGGC GGATCATGTC CCTCGCCCAC
ACCCATTCGG TCCTGACCGA AGATGTCTGG CAGACGGCCT CCCTGCGCGG CCTCCTGGAG
AACGAGCTGA CGCCCTACGC GGACGGGCCG ATGACGCCGG AGGCGGACGG GCGGGTCACC
CTCGAGGGCC CGGCCGTCGA CCTCGCCTCC GAGATCGCGG TGCCGATCGG CATGGCGATC
CACGAACTCA CCACCAACGC GGCGAAGTAC GGCGCCCTCT CGGGCCGGGC CGGGCGGGTG
CGGGTGCGCT GGTCCCTGGA GCCCGAGGAC GACCGCGTCG TGCTGCGCTT CGAGTGGCGC
GAGTCGGGCG GGCCGCCGGT GGCGCCGCCG ACCCGCCAGG GTTTCGGCTC CCGCCTGCTG
CAGCGGGTGC TCTCGACCCA GGTCCAGGCG AACGTGGCGA TCGACTACGC GCCGGACGGC
CTGCGCCTGA CCATGCTGGC CCCCCTGCCG AAGCGCAACG TGGCCCTCAA TCCCCTGGCC
AAGCTCTGA
 
Protein sequence
MAAGHAGHHP RRPSLATGAV RRGDDAARGW ADRTRVCEER VDRLSRRPGD PAGPAGPGVR 
PVGRALDHRP DQQPDRPGDA PAPGHTGDAL LRFAFEAAPV GIACLSGPDD RLVAANARLC
ALLAAAPEDL LGRCLADLVD AAGAPADPVS GAGIEQCWRR GDGGTVWVTV RAGPSRDGQR
VLTVEPAEDH GAAARAEQTR LALAFSGLGD WSWSRASGQI TLSERAAEIL GLAPGPSVAA
ETLEPRLHRD DLERARALVQ EAAPLGRAYA VDLRYRRPPD GQEVWISVRG RAQLGPDGAV
VGMIGVVQDV TAREEARRAL HDREQRLRVA TSVAALGIFE WHLLDDQALW ENERMWEIFG
RRPQDGTISM TEFFREVMHP EDKGPFRAAV ADALQGEGVL HATGRIRRAS DGTWRTIEMA
GRFERDNPGG LPRRLIGVVA DITDRRLAEE RQTLLIRELH HRVKNTLATV QAIVGSTART
ASSIESFYEA FVGRIMSLAH THSVLTEDVW QTASLRGLLE NELTPYADGP MTPEADGRVT
LEGPAVDLAS EIAVPIGMAI HELTTNAAKY GALSGRAGRV RVRWSLEPED DRVVLRFEWR
ESGGPPVAPP TRQGFGSRLL QRVLSTQVQA NVAIDYAPDG LRLTMLAPLP KRNVALNPLA
KL