Gene M446_5239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5239 
Symbol 
ID6130532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5758835 
End bp5759494 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content76% 
IMG OID641645373 
ProductTPR repeat-containing protein 
Protein accessionYP_001771997 
Protein GI170743342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.993691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.01877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG CCGAGACTGT CAACCGGCGC GGCGCGAGCG AGGCGGAGAT CCGCCGCGCC 
CTCGCGGAGT GCCTGCACAG CCAGACCTTC CGGCGCTCCC CCAAGCTCGC CGCCTTCCTG
ACCTTCATCG TCGAGGAGGA ACTGGCCGGG CGGGGCGAGG CGATCAAGGC CTACACGATC
GCCACCCGGG CCCTGAACCG CGCGACCAGC TTTGACCCGG CCAACGATCC CAGCGTCAGG
GTCGAGGCGG GCCGCCTGCG CCGGGCGCTG GAGGAGGCCC AGGCCGAGGA TGGCGGGGAG
CGGCCCTTGC GCATCCACGT GCCGGTGGGC GGCTACCGGC CGGTCTTCGA GGTGCGCGAG
CGCGCCGCGG GCGCACCGGA GGGGCCGCCC CTGCCGGTGA TCCCGATCCC GGCGCCGCCG
CTCCCGCCGG CGCACCTCCC GGTGGCGGCG CCGCTCTTCG ATTCCCGCGG GCAGGCGATC
ATCGCCGGGC TCCTCGCGGC CATCGTCGTC CTGCTCGCCG TCGACGTCGC CTTCCACGGC
TACATGGCGG TCACGGTGCG CGGCGCCGCG CCGGACCCCG AGCGCGCCGG CTTCACCCGC
ACCGTCCCGG ACGCGCGCGA CGCCGCCCGC GCCGCGCTGG ACGAGGTCCA GACCCGCTGA
 
Protein sequence
MIDAETVNRR GASEAEIRRA LAECLHSQTF RRSPKLAAFL TFIVEEELAG RGEAIKAYTI 
ATRALNRATS FDPANDPSVR VEAGRLRRAL EEAQAEDGGE RPLRIHVPVG GYRPVFEVRE
RAAGAPEGPP LPVIPIPAPP LPPAHLPVAA PLFDSRGQAI IAGLLAAIVV LLAVDVAFHG
YMAVTVRGAA PDPERAGFTR TVPDARDAAR AALDEVQTR