Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5234 |
Symbol | |
ID | 6131148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 5754348 |
End bp | 5756384 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641645368 |
Product | elongation factor G |
Protein accession | YP_001771992 |
Protein GI | 170743337 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00485318 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGGCTGGGC AGACCCGGTG CATCGCGATC GTCGGACCCT TCCAGAGCGG CAAGACCGCG CTCCTGGAAG CCATCCTCCA CCGCACGGGC GCGATCGACC GCCCCGGCCG CGCCGCCTCG GGCAACCGGG TCGGCGACAC CTCCGCGGAG GCCAAGGCGC ACGGCATGAG CGTGGAGCCG GCCGTCGCCA GCGTCGAGTT CCTCGGCGAC AGCTTCACCT TCGTGGATTG CCCGGGCTCG GTGGAATTCG CCCACGACGT GCGGGCCGTG CTGCCGGTCT GCGACGCGGC GGTGGTGGTC TGCGAGGCGG ACGAGCGCAA GCGCCCGGCC CTGGAACTGT GCCTGCGCGA CCTCGAAGCC GCCGGCATCC CGCGGCTCCT GTTCATCAAC AAGGCGGATG CGGCGCCGGG CTCGCTGCGC GACGCGCTGG CCCTGCTCCA GCCCGCCTCG CGGGTGCCCC TGCTCCTGCG CCAGATCCCG CTCTGGCAGG GCGAGACCGC GGTCGGCTTC ATCGACCTCG CCCTGGAGCG GGCCTTCATC TACCGCGAGC AGGCGCCGAG CGAGGTGGTC GACCTGCCCG AGGGCGAGTG GCCGCGCGAG AAGGCCGAGC GCTTCACCAT GCTGGAGCGC CTCGCCGACC ACGACGACGC GCTGATGGAG GACCTGATCT CCGAGATCGA GCCCGCCCGC GACCGGGTCT TCGCCGACCT CTCGCGGGAG TTGCGCGAGG GGCAGGTTGT CTCGGTCCTG TTCGGCGCGG CCGAGCACGG CAACGGGGTC ACGCGCCTGC TCAAGGCCCT GCGCCACGAG GCGCCGGGGC TGACCGAGAC GCGCGCCCGC CTCGGGGTGG CGGAGACGGG GCCGGCCCTC GCCCAGGTGA TCAAGACCCT GCATTCGGGC TTCGGCGGCA AGCTCTCGGT GGCGCGGGTG CTGCGCGGGA GCCTGCGCGA GGGCGACGCG GTCACCGGGA GCGGGGGCCA GGGCGGGCGC ATCGCCGGCC TCACGGCGCT CACCGGCGCG GCCGGGGCCC GGGTGGCCGA GGCCCGCGAC GGCGAGGTGG CGGGCCTCGC CAAGCTCGAC GCCGTCGCGA CCGCCGAGAC GCTGCAGGCG GGCGGCGAGG TGCCGCCGGC CCTGGTGGCG CTGCCGCGGC CCGAGCCGGT CCACGCCGTC GCCCTGCGCA TCCGCGACCG CAAGGACGAC GTGCGCCTCG CCGGGGCGCT GGCCAAGGTG CTGGAGGAGG ATCCGGCCCT GGCGCTGGAG CAGCACGCCG ATCTCGGCGA GATGCGCCTG ACCGGCCAGG GCGAGATGCA CCTGCGGGTG GCGGTGGAGC GGCTCGCCTC GCGCTTCGGC ATCGGGGTCG ACACGGACCG CGCCAAGGTC GGCTACCGCG AGACGATCCG GGGCACGGCC GCGGCCCGGG CGCGCCACAA GAAGCAGACC GGCGGCCACG GCCAGTTCGC CGACGTGGCG ATCACGGTAC GGCCGACGCC GCGGGGCGCG GGGTTCCTCT TCGAGGACGA GGTCGTGGGC GGCGCCGTGC CGCGGCAATA TATCGGCTCG GTCGAGGCGG GGGCCCGGGC CTGCATGGCG CGCGGGCCCC TGGGCTTTCC GGTGGTCGAC GTCGCCGTGA CCCTCACGGA CGGGGCGGCG CACGCGGTCG ATTCCTCCGA CGCCGCCTTC CAGGCCGCGA CGCGCCTCGC CCTCGAGGAG GCCCTGCCCA AGGCCGGCCC GGTGCTGCTG GAGCCGATCC TCGCGGTCGC GCTCGCGGTG CCGTCCACCG CGACCGCGAA GGCGACCGGG CTCGTCACGG CGCGGCGGGG GCAGATCCTC GGCTTCGACG CACGGCCCGG CTGGCCGGGC TGGGACCAGG TCGAGGCGCT GATCCCGGAG GCGGAGATGA GCGGGCTCAT CGTGGAGCTG CGCTCGATCA CCGCGGGGGT CGGCAGCTAC ACGGCCCGGT TCGACCACCG GGCCGAGCTG ACCGGGCGGC CGGCCGACGC GGTCCTGGCC GCCCAGCCGG TGCGCAAGGC GGGCTGA
|
Protein sequence | MAGQTRCIAI VGPFQSGKTA LLEAILHRTG AIDRPGRAAS GNRVGDTSAE AKAHGMSVEP AVASVEFLGD SFTFVDCPGS VEFAHDVRAV LPVCDAAVVV CEADERKRPA LELCLRDLEA AGIPRLLFIN KADAAPGSLR DALALLQPAS RVPLLLRQIP LWQGETAVGF IDLALERAFI YREQAPSEVV DLPEGEWPRE KAERFTMLER LADHDDALME DLISEIEPAR DRVFADLSRE LREGQVVSVL FGAAEHGNGV TRLLKALRHE APGLTETRAR LGVAETGPAL AQVIKTLHSG FGGKLSVARV LRGSLREGDA VTGSGGQGGR IAGLTALTGA AGARVAEARD GEVAGLAKLD AVATAETLQA GGEVPPALVA LPRPEPVHAV ALRIRDRKDD VRLAGALAKV LEEDPALALE QHADLGEMRL TGQGEMHLRV AVERLASRFG IGVDTDRAKV GYRETIRGTA AARARHKKQT GGHGQFADVA ITVRPTPRGA GFLFEDEVVG GAVPRQYIGS VEAGARACMA RGPLGFPVVD VAVTLTDGAA HAVDSSDAAF QAATRLALEE ALPKAGPVLL EPILAVALAV PSTATAKATG LVTARRGQIL GFDARPGWPG WDQVEALIPE AEMSGLIVEL RSITAGVGSY TARFDHRAEL TGRPADAVLA AQPVRKAG
|
| |