Gene M446_5189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5189 
Symbol 
ID6135572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5713012 
End bp5713995 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content65% 
IMG OID641645324 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_001771948 
Protein GI170743293 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.728187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.051531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA GACGTGCCTT GATCACCGGA ATTACCGGCC AGGATGGGGC CTACCTGGCG 
CAGCTTCTGC TTGAAAAAGA CTACGAAGTC TACGGTATTG TCCGTCGGTC GAGCCATGCT
GGTGTTTATG ATCACAGGCT GAAGTGGCTC GGCGTTGCCA AGGACGTTCA CCTCATCGAC
GGCAATCTGA TCGATCTGTC GAGCCTGCTG CGCATCGTCC AGCAGGTCCG GCCCGATGAG
GTTTACAACC TCGCCGCACA GTCGTTCGTC ACCTCGTCCT GGCAGCAGCC GATCCTCACC
GGGCAGGTGA CCGGCCTCGG GGCGACCAAC CTGCTCGAAG CGGTCCGCAT CATGGCCCCG
CAGGCGCGCT ACTACCAGGC CTCCTCGTCG GAGATGTTCG GCCTGATCCA GGAGCAGGTG
CAGAGCGAGC AGACCCCCTT CTACCCGCGC TCCCCGTACG GCGTCGCCAA GCTCTACGCG
CACTGGATGA CGATCAACTA CCGGGAGAGT TTCGGCCTGC ACGCCTCGAA CGGCATCCTG
TTCAACCACG AATCCCCGCT GCGCGGGGTC GAGTTCGTGA CCCGCAAGGT CACGGACGGC
GTCGCGCGCA TCAAGCTCGG CCTCGAGACG GAACTGCGGC TCGGCAACAT CGACGCGAAG
CGGGACTGGG GCCACGCCAA GGACTACGTC CGGGCGATGT GGCTCATGCT GCAGCAGGAC
GCGCCGGACG ACTACGTGGT GGCGACCGGG CGCACCACCA CCGTGCGCGA CATGTGCCGG
ATCGCCTTCG ACCACGTGGG CCTGACCATG GACGACCACC TCCGGATCGA CGAGAAGCTG
TTCCGCCCGG CCGAGGTCGA CGTGCTCCTC GGCAACCCTG CCAAGGCCGA GCGCATTCTG
GGCTGGAAGC CGGAGATCTC GCTCGAGGAG ATGATCACCG AGATGGTCGA CGCGGACCTC
GCCCGCCTGC GCGCCTCCGT CTGA
 
Protein sequence
MTRRRALITG ITGQDGAYLA QLLLEKDYEV YGIVRRSSHA GVYDHRLKWL GVAKDVHLID 
GNLIDLSSLL RIVQQVRPDE VYNLAAQSFV TSSWQQPILT GQVTGLGATN LLEAVRIMAP
QARYYQASSS EMFGLIQEQV QSEQTPFYPR SPYGVAKLYA HWMTINYRES FGLHASNGIL
FNHESPLRGV EFVTRKVTDG VARIKLGLET ELRLGNIDAK RDWGHAKDYV RAMWLMLQQD
APDDYVVATG RTTTVRDMCR IAFDHVGLTM DDHLRIDEKL FRPAEVDVLL GNPAKAERIL
GWKPEISLEE MITEMVDADL ARLRASV