Gene M446_4889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4889 
Symbol 
ID6132286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5368770 
End bp5370155 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content73% 
IMG OID641645025 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001771652 
Protein GI170742997 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.289635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00139676 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGAATG AGGCTTCGCC GATCGACCTC GTGCACGACG CGCGTCACCT GCGCCTGGAC 
ACGCTCGTGC GCCTGCGCTG GCTCGCCATC ACGGGCCAGA GCGCCGCGGT GGCGGGCGCG
CATCTCGGGC TCGGCCTGCC CCTGCCCTTC GGCTGGTGCT TCCTCGTCAT CGCGGCCTCC
TCCTGGCTGA ACCTCATCCT GCGGGTGCGC TTCCCGGCGA GCTACCGGCT GAGCGACACG
TCGGCGGCGC TGCTGCTCGC CTTCGACATC GTCCAGCTCG CCGCGCTCCT GTTCCTCACC
GGCGGGCTGC AGAATCCCTT CTCGCTCCTC TTCCTCGCCC CGGTCCTGAT CTCCGCGACG
GCCCTGCCCC CGGCCCACAC CCTGGCCCTC GGCCTGTTCG CGGTCGGCCT GTCGACGCTG
CTCGCCCTCG TCCACCGGCC GCTGCCGTGG TTCTCGGCGG AGCGGATGGA GATCCCCTTC
CTCTACGTCT CGGGGGTCTG GACCGCGATC CTGCTCGGCA TCGCCTTCAC GGGCGTCTAC
GCGTGGCGGG TCGCCGAGGA GGCGCGCCAG CTCGCCCAGG CGCTCGCCGC GACCGAGCTG
GTCCTCGCCC GCGAGCAGCA CCTGTCGCAG CTCGACGGGC TCGCGGCGGC GGCCGCGCAC
GAACTCGGCA CGCCGCTCGC CACCATCACG GTGGTGGTCA GCGAACTCGA CCGGGCGCTC
GGCCCCGCCG CCACGCCCGC GGTCGCCGAG GACCTGAAGC TCCTGCGCGA GCAGGTCGAG
CGCTGCCGGG GCATCCTGTC GAAGCTCACC TCCCTGGACG AGGACCAGTC GAGCTTCCTG
GAGACGATCT CGCTCAGCCA CCTCGTAGAG GAGCTGGTGG CGCCCCAGCG GGCGCTCGGG
ATCATCCTCG ACGTCTCGAC CCGCGGCGAG GGGACGGAGC CCCGCTGCCG GCGCAATCCC
GGCGTGCTCT ACGGGCTCTC GAACATCGTC GACAACGCGG TGGACTTCGC CGAGAGCCGC
GTCGTCATCG AGGCGCGCTG GAGCGCGGAC CGGGTCTGGC TGGAGATCCG CGACGACGGC
CCGGGCTTCG CCCCCGACGT GCTGCTGCGG GTCGGCGAGC CCTACGTCAC GACGCGGGGC
GCCGGGCGCT CGGGCAGCGG CGAGGAGGGC GGATCGGGGC TCGGGCTCGG CCTGTTCATC
GCCAAGACCC TGATCGAGCG CTCGGGCGCC CAGATCGCCC TCGCCAACGC GGCCGATCCC
TCGACCGGCG CCGTGGTGCG CATCGCCTGG CCGCGTCACG TTTTCGAGAG GGACGTGGCG
GCGCGCAAAT TCGGGGGAAC GAGCGGCGCT CTCCCCCTGA CGACGGCCCG CGACGTTCCT
ATATAA
 
Protein sequence
MTNEASPIDL VHDARHLRLD TLVRLRWLAI TGQSAAVAGA HLGLGLPLPF GWCFLVIAAS 
SWLNLILRVR FPASYRLSDT SAALLLAFDI VQLAALLFLT GGLQNPFSLL FLAPVLISAT
ALPPAHTLAL GLFAVGLSTL LALVHRPLPW FSAERMEIPF LYVSGVWTAI LLGIAFTGVY
AWRVAEEARQ LAQALAATEL VLAREQHLSQ LDGLAAAAAH ELGTPLATIT VVVSELDRAL
GPAATPAVAE DLKLLREQVE RCRGILSKLT SLDEDQSSFL ETISLSHLVE ELVAPQRALG
IILDVSTRGE GTEPRCRRNP GVLYGLSNIV DNAVDFAESR VVIEARWSAD RVWLEIRDDG
PGFAPDVLLR VGEPYVTTRG AGRSGSGEEG GSGLGLGLFI AKTLIERSGA QIALANAADP
STGAVVRIAW PRHVFERDVA ARKFGGTSGA LPLTTARDVP I