Gene M446_4640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4640 
Symbol 
ID6129469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5100162 
End bp5102321 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content71% 
IMG OID641644779 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001771414 
Protein GI170742759 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0269226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.305736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCG ATCGCATCCT GAGGAGCGCG GCGCTCCTCA CCCTGGCGGC TGCGGGCGCA 
CCGGCCCTTG CCGCGCCGCG CCCGACCGGG ACCGAAGCCC CGGCGCGGCC GGCGCCCGCC
GACGTCCTGG CGCTGCCGGA ATTGATCATC GCCGGTTGGC GCGACGGCGC GACCACCGAG
GGCAGCGGCT CCTTCACGAG CGATGCCGTC ACCGTCGCCG GCAAGGCCCC GGTGCGCCGC
ATCGACGTTC CGTACTCGGT CTCGGTCGTC ACCCGGCGCC AGATCGAGGA CCAGACCTTG
ACCACGGTCG ACGAGGCGCT GGCCCGCGCC ACGGGCGTCA CCCGGATCTC GAACGAGCCG
TCCCAGAGCC AGTACCTCAT CCGCGGCTAC GACCCGCAGG CGATGTCCGA CGGCGTTCCG
GTGCTCGGCG GGCTGAGCGG CTACCAGCAA CTCGACACGG TGCTGTACGA CCGGATCGAG
GTGCTGCGCG GGCCCGCCGG GCTGCTCCTG GGCCAGGGTG AGCCCGCCGG CGTCGTCAAT
TTCGTGAGGA AGCGTCCTCG GGAGACCTTC GGCGCCTCCC TGGCGACCAG CTACGGCTCC
TGGGCCAACA AGCGCGTCGA ACTCGACCTC ACGGGGCCGC TCGGCGGGGA GAGCGGCGTG
CGCTGGCGGG GGATCCTGGC CGGGACCGAC CGCGACTCCT CCTTCCGGGA CGGGCACGGC
ACGCGCGGGC TCGGCGCCGG CATGATCTCG ATCGACCTGA CGCCCCGGAC CACCCTGTCG
CTCTCGGCCG TCCGCCAGGG CGACCTCTCG CCGTCCTTCT CGGGCCTCCC GGCCGATGCC
GCGACCCGGC GCTTCCTGCG CGTGCCCCGC GACACCAACC CCTACCCGGC CTGGGCCAGG
AACCAGTGGA CGACCCAGGA ATACGCGGCC GAACTCGAGC ACCGGTTCGG CGAATGGGTG
CTCAGAGCCG CCTATGTCCG CCGCTTGCAG GACTTCGCGT TCAAGGACGC GTACCCGGTC
ACCGGCACCG ATCCGGCCGG CAATGCCAAG TATGCGCGGC GCTGGAGCAT CTGGAGCTAC
GACCGGGAGG GGGCCGACCT CTCCGTGCAG GGACCGGTCG AGGCGTTCGG GCGCCGGCAC
GAGGTGCTGC TCGGGATGAA CGCCATGTCC TGGTCGCAGG CCGGCCGGCG CGTGAACTAC
CCCCAGGTGG ACGGCAACAT CTTCGACCCG AATGCCGGCG TGGCGGAGCC GTTCGGCCCG
TTCACCCGCG GGAGCCGCAA CCTGCAAGAG CAGTGGGGCG TCTACGGCCA GACGCGGCTG
CGCCTTCTCG ACCCGCTCAC GCTCGTCCTC GGCGGGCGCC TCTCCTCCTA CGAGGCCCGC
TCCCGGGCCG CCGCCCCGAG CCGCGGCACC CCCTGGGAGA CCGACACGTC GGCCACGGCG
CGGCCCTCGC CCTACGGGGC GCTGGTCTAC GAACTCACGC CCGGGCTCAA CGCCTATGCG
AGCTACGCGG ACATCTTCCT TCCGCAGACG GATCCGAAAT GGCCGAGCGG CGTCATCGAT
CCCCGGGTCG GCACGCAATA CGAGGTCGGC CTGAAGGGTG AGGCCCTGGA GGGGCGCCTG
CAGGCCTCCG CCGCGCTGTT CCGGATCGAC GACGTCAACC GCGCCTTCGA CGACGCGGCC
CACCCGAACT ACTCCGTCGC CCTCGGCAAG GCGCGGAGCG AGGGCGTCGA GGTCGAGGTC
TCGGGCGAGC TTCTCCCGGG CTGGCAGGCC GTGGCCGGCT ACACCTATGC CCGGACGGAG
TTGTTGAGGG ACGATTCCCG GACGGGCGCG CGCCTGACGA ACTGGCTGCC CAAGCACAGC
GTGAAGCTGT GGTCGCAATA CGACGTCCAG GAAGGCCCGC TGCGGGGCGT CTTCGTCGGT
CTCGGCCTCG TCGCCGCCTC GACCACCTCC GACCAGGGAC GCGTTCCGGT CCGCTTCCAG
CCGCCCTACG CGGTCCTCGA CCTCCAGATC GGCTACGCGG TGAACCGGAC CCTGAAAGCG
ACCCTGTCCG TCAACAACGT GCTCGACACG GTCTATCGCA CGCGGATCGG CGGCCTCAAC
ACCTACAACA CCTACGGGGA TCCGAGGAAC GTGATGCTGA CGCTGCGCGC CACGTTCTGA
 
Protein sequence
MTIDRILRSA ALLTLAAAGA PALAAPRPTG TEAPARPAPA DVLALPELII AGWRDGATTE 
GSGSFTSDAV TVAGKAPVRR IDVPYSVSVV TRRQIEDQTL TTVDEALARA TGVTRISNEP
SQSQYLIRGY DPQAMSDGVP VLGGLSGYQQ LDTVLYDRIE VLRGPAGLLL GQGEPAGVVN
FVRKRPRETF GASLATSYGS WANKRVELDL TGPLGGESGV RWRGILAGTD RDSSFRDGHG
TRGLGAGMIS IDLTPRTTLS LSAVRQGDLS PSFSGLPADA ATRRFLRVPR DTNPYPAWAR
NQWTTQEYAA ELEHRFGEWV LRAAYVRRLQ DFAFKDAYPV TGTDPAGNAK YARRWSIWSY
DREGADLSVQ GPVEAFGRRH EVLLGMNAMS WSQAGRRVNY PQVDGNIFDP NAGVAEPFGP
FTRGSRNLQE QWGVYGQTRL RLLDPLTLVL GGRLSSYEAR SRAAAPSRGT PWETDTSATA
RPSPYGALVY ELTPGLNAYA SYADIFLPQT DPKWPSGVID PRVGTQYEVG LKGEALEGRL
QASAALFRID DVNRAFDDAA HPNYSVALGK ARSEGVEVEV SGELLPGWQA VAGYTYARTE
LLRDDSRTGA RLTNWLPKHS VKLWSQYDVQ EGPLRGVFVG LGLVAASTTS DQGRVPVRFQ
PPYAVLDLQI GYAVNRTLKA TLSVNNVLDT VYRTRIGGLN TYNTYGDPRN VMLTLRATF