| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4598 |
|---|
| Symbol | |
|---|
| ID | 6134190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 5055841 |
|---|
| End bp | 5057586 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641644737 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001771372 |
|---|
| Protein GI | 170742717 |
|---|
| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0649502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.461096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG TGGCCGACGT GCGCCCGCCG GAGATCCCGT TCCTCGGCCC CCTCGACCCC
GTCACCGCCG CCGCCGTGCG CGCGCGCCTG GAGCCGATCG CGGTGCCGGG CGGCGCGGTG
CTGTTCGAGC AGGACGCGCC CGCCGACGCG CTCTACGCCC TCGTCTCGGG GGCGATCGGG
ATCTCGGCGC GCGACCCCCT CACGGGGGAG GCGCGGCCCG TCGCCCGCGT GCGCCCGCCC
GAGACCGTGG GCGAGATGGC CCTCCTCTCC GGCGAGCCGC GCTCGGCCAC CGCGACGGTG
CTGCGCGATT CCGCCCTGCT GCGATTGTCG AAGCGCGCCT TCGACGACCT CGTCGCCCGC
CACCCGGCGA CGATGCTCTA CTTCGCCCGG CTCCTGGCCT CGCGGCTGCG CAGCGCCTCG
GCCTGCACGC CGGTGGCGAC GACGCCGATG ACCTTCGCGG TGATCGGCGT GACCGAGGGC
GTCGACGTGC CGGCCTTCGC GCGGGGCTTC GCGGCGGCCC TGCCCGGGCG CTCGGCCCTG
CTCACCGCCT GGCCCGACGA CGCGGACGAG ACCTGGTTCC ACGCCCTGGA GACCGCGCAG
GACCAGGTCG TCTACGCGGC CGAGGCGCCG GGCTCGGGCT GGGCCAATCT CTGCCTGCGG
CGGGCCGACC ACGTCCTGCT GCTGGCCGCG CCCGGGCGCC GGCCCGGCGC GGCCTTCTCG
GGTCGGATCA CCATGCCGAT GCAGGGCTGG ACCCACCAGG ACCTCGTCGT CCTCAACCCC
GCCGACGCGC AGCGGCCCGG CCCGCTCGAC CCGGCGCTGG CGGCGCTGCC GGTGGAGCTC
CGCCTCCAGG CCCGGGCCGG GAACGCCGCC GACCTCGCCC GGGTCGCCCG GCTCGCCGGA
GGGCGCGCCC GGGGGCTCGT GCTCGGCGGG GGCGGGGCGC GCGGCTTCGC GCATCTCGGC
GTGATCCGGG CGCTCACCGA GGCCGGCCAC GCGGTCGACC TCGTGGCCGG GACCAGCATG
GGCGCGGTGG TGGCCGCCAG CCTCGCCATG GGCTGGGACC TGGAGGAGAT CGGCGCCCAC
ACGGTGGCGG CCTTCGTGGC GAGCTCGCCC CTCAACGACT ACACGCTGCC GATCACCGCC
CTCACCCGCG GCGCGAAGGT GGACCGCCGC CTCGCCCAGC ATTTCGGCGA GGCGCGGATC
GAGGATCTCT GGCTGCCCTA CTTCTGCGTC TCCTCGAACC TGACCACCGG CGCGGCGATG
ATCCACCGGG CGGGGCCGCT CGTGACGGCC CTGCGCGCCA GCATCGCGGT CCCGGGCCTG
CTGCCGCCGG TCCTCCACCC GGAGGGCGTG CTGGTGGACG GGGGCGTGAT GAACAACCTG
CCGGCCGATC TGATGGCGGG CCTGCGCCGC GGCACCGTGC TGGCGGTCGA CGTGGCGAGC
GACCTCGCCC TCGCCACCAT GCCCGAGCGC CCGTTCCGCT CCCGGCTGGT GCGCCGCGCC
CTCGGGGTGC CCTTCGCGAT GCCGGGCATC GCCCAGATCC TGCTGCGGGC CGCCACCGTG
TCGAGCGACG CCTCGGCGGC GATGGCGCGG GGCCGGGCGA CGGCCTTCCT GCAGCCGCCC
CTCGCCGGCA TCGACCTGCG CGCGTGGCGC AGCTACGCGG CCGTGGCCGA GATCGGCTAC
CGGCACGCCC GCGCCAAGCT GGAGGAGGGC GCCCTGGAGG GCTGGGCGGC GGGGCGCGCC
GGGTGA
|
|---|
| Protein sequence | MDIVADVRPP EIPFLGPLDP VTAAAVRARL EPIAVPGGAV LFEQDAPADA LYALVSGAIG
ISARDPLTGE ARPVARVRPP ETVGEMALLS GEPRSATATV LRDSALLRLS KRAFDDLVAR
HPATMLYFAR LLASRLRSAS ACTPVATTPM TFAVIGVTEG VDVPAFARGF AAALPGRSAL
LTAWPDDADE TWFHALETAQ DQVVYAAEAP GSGWANLCLR RADHVLLLAA PGRRPGAAFS
GRITMPMQGW THQDLVVLNP ADAQRPGPLD PALAALPVEL RLQARAGNAA DLARVARLAG
GRARGLVLGG GGARGFAHLG VIRALTEAGH AVDLVAGTSM GAVVAASLAM GWDLEEIGAH
TVAAFVASSP LNDYTLPITA LTRGAKVDRR LAQHFGEARI EDLWLPYFCV SSNLTTGAAM
IHRAGPLVTA LRASIAVPGL LPPVLHPEGV LVDGGVMNNL PADLMAGLRR GTVLAVDVAS
DLALATMPER PFRSRLVRRA LGVPFAMPGI AQILLRAATV SSDASAAMAR GRATAFLQPP
LAGIDLRAWR SYAAVAEIGY RHARAKLEEG ALEGWAAGRA G
|
|---|
| |