Gene M446_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4580 
Symbol 
ID6129738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5040008 
End bp5040709 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content80% 
IMG OID641644720 
Productphage shock protein A, PspA 
Protein accessionYP_001771355 
Protein GI170742700 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0606937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0580714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGGA TCTTCGCCAC CCTCGCCCGC GGGGCCGCCG CCCGCGCCTG CGAGGACGTC 
CTGGACCAGC ACGCGCTTCC CCTCCTCGAG CAGCAGATCC GGGAGGCCGC GGCCGCCCTC
GACGGCAGCC GCCGGGCCCT GGCGCAGGCG ATGGCTCAGC AGGGCGCCGA CGCCAAGCGC
GAGGCCGGCC TGCGGGACCG GCTCGCCGAC CTGGAGACCC GCGCGGTCGC GGCGCTGGCG
GGCGGGCGGG AGGACCTCGC CGGCGAGGCC GCCGAGGCGA TCGCGGCGCT GGAGGCCGAC
CTCGCGTCGT TGGCCGAGGC GCGTGCGGCC TTCGACAGGG AGGTCGAGGC CCTGCGCCGC
ACCGTCCAGG AGGGCGGGCG CCAACTCGCC GAGTTGGAGC GCGGCCGGCG GCTCGCCGAG
GCCGGCGAGG CGGTGCGCCG CCTGCGCGTC CGCCGCGGCG AGGGCGCGCC CGGCGCGGGC
CCGGCGCTGG CGGAGGCGCA GGCCACGCTG CGCCGGCTGC GCGAGAAGCA GGCGCAGGAG
GCCGCCGTGG CGGAAGCGAT GACCATCCTC GACGCCGCGC AGCCCGCGGG CATCGCCGAG
CGGCTGGAGG AGGCGGGCTT CGGTCCCCGC ACCCGTCCCA ATGCCGCGGG CGTCATGGAG
CGCCTGCGGG CCAAAGCGGC CGGTGCTCCG GCCGCGTCCT GA
 
Protein sequence
MLRIFATLAR GAAARACEDV LDQHALPLLE QQIREAAAAL DGSRRALAQA MAQQGADAKR 
EAGLRDRLAD LETRAVAALA GGREDLAGEA AEAIAALEAD LASLAEARAA FDREVEALRR
TVQEGGRQLA ELERGRRLAE AGEAVRRLRV RRGEGAPGAG PALAEAQATL RRLREKQAQE
AAVAEAMTIL DAAQPAGIAE RLEEAGFGPR TRPNAAGVME RLRAKAAGAP AAS