Gene M446_4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4546 
Symbol 
ID6135159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5002467 
End bp5003249 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID641644686 
ProductABC transporter related 
Protein accessionYP_001771321 
Protein GI170742666 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.159121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0112462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCG CGCCCCTCGT CGAGACGCCG CCCGCCGCCG CCGGTTCCGG CCCGATGATC 
GTGATCGATC AGGTCAGCAA GTGGTACGGC GACTTCCAGG TGCTGACGAA TTGCACCACC
TCGATCCGGA AGGGCGAGGT GGTGGTGGTC TGCGGCCCCT CGGGCTCCGG CAAGTCCACC
CTGATCAAGT GCGTGAACGC CCTCGAACCG TTCCAGAAGG GGCAGATCAC GGTCGACGGG
ACGCGGATCG CCGACAAGAA GACCAACCTG CCGAAGCTGC GCTCGCGCGT CGGCATGGTG
TTCCAGCATT TCGAGCTGTT CCCGCACCTC TCGATCACCG ACAACCTGAC GCTCGCCCAG
CGCAAGGTGC TGGGCCGCAG CCGCGCCGAG GCGGAGGCGA AGGGCCTCGC GCTGCTGGAG
CGGGTCGGGC TGAAGGCGCA CGCGCACAAG TTCCCGGGCC AGCTCTCGGG CGGGCAGCAG
CAGCGCGTGG CGATCGCCCG GGCGCTCGCC ATGAACCCGA TCGTGATGCT GTTCGACGAG
CCCACCTCCG CCCTCGACCC CGAGATGGTC GGCGAGGTGC TGGACGTGAT GGTGGAGCTC
GCCCGCGAGG GCATGACCAT GATGGTCGTC ACCCACGAGA TGGGCTTCGC CCGCAAGGTG
GCGAACCGGG TGATCTTCAT GGACCGCGGC GAGATCGTCG AGGACGCGCA GAAGGAGGAG
TTCTTCGGAT CGCCCCGCAG CGAGCGCGCC CAGACCTTCC TGTCCAAGAT CCTGTCCCAC
TGA
 
Protein sequence
MSSAPLVETP PAAAGSGPMI VIDQVSKWYG DFQVLTNCTT SIRKGEVVVV CGPSGSGKST 
LIKCVNALEP FQKGQITVDG TRIADKKTNL PKLRSRVGMV FQHFELFPHL SITDNLTLAQ
RKVLGRSRAE AEAKGLALLE RVGLKAHAHK FPGQLSGGQQ QRVAIARALA MNPIVMLFDE
PTSALDPEMV GEVLDVMVEL AREGMTMMVV THEMGFARKV ANRVIFMDRG EIVEDAQKEE
FFGSPRSERA QTFLSKILSH