| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_4431 |
|---|
| Symbol | |
|---|
| ID | 6130313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 4884702 |
|---|
| End bp | 4886684 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641644572 |
|---|
| Product | cytochrome c-type biogenesis protein CcmF |
|---|
| Protein accession | YP_001771207 |
|---|
| Protein GI | 170742552 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1138] Cytochrome c biogenesis factor |
|---|
| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.938091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.729062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGATCG AGGCTGGTCA CTACGCGCTG GCGCTCGCGC TCGCCCTCTC GCTCGCCCAG
GCGGTGATGC CGGCCTGGGC CGCCCGCGCC CGCGACCCAA TCCTGCGCAG CGTCGCCGTT
CCGGCCGCGC TCGCGACCTT CGCCTGCATC GCCTTCGCGT TCGCCGCCCT CACGCTGGCG
CATGTGCGCT CGGACTTCTC GGTCCTCAAC GTGTTCGAGA ATTCCCACTC GCTCAAGCCG
CTCGTCTACA AGATCTCCGG CGTCTGGGGG AACCACGAGG GCTCGATGCT CCTCTGGGTG
CTGATCCTGG CGCTGTTCGG GGCGATCGTG GCGCTCGCCC GCGATTCGGT TCCGGCGGCC
CTGCGGGCCA ACACGCTGGG CGTGCAGGCC ACGGTCACCT TCGTGTTCCT GCTCTTCATC
CTGACGACGT CGAACCCCTT CGCGCGGCTC GACCCCGCCC CGGCCGAGGG ACGCGACCTC
AACCCGATCC TCCAGGATCC GGGCCTCGCG ATCCACCCGC CGCTCCTCTA CCTCGGCTAT
GTCGGGTTCT CGATCACCTT CGCCTTCGCG ATCGCGGCAC TCCTCGAGGG GCGCATCGAC
GCGGTCTGGG CCCGGGCGGT GCGGCCCTGG ACGCTCCTGG CATGGTGCTT CCTCACGGTC
GGCATCGCGA TGGGCTCGTA CTGGGCCTAT TACGAGCTCG GCTGGGGCGG CTGGTGGTTC
TGGGACCCGG TCGAGAACGC CTCGCTGATG CCCTGGCTCG CCGGGACCGC GCTGATCCAC
TCCACCGTCG TGATGGAGAA GCGCGACGCG CTCAAGGTCT GGACGGTGCT GCTCGCCATC
CTGACCTTCT CGCTCTCGCT GCTCGGCACG TTCCTGGTGC GCTCGGGCGT GCTCACCTCG
GTCCACACCT TCGCGACCGA CCCGGCGCGC GGCACCTTCA TCCTCGCCAT CCTGGTCCTG
TTCATCGGCG GCTCGCTGGC GCTGTTCGCG TGGCGGGCGC CGCTGCTGCG CCAGGGCGGG
ATCTTCGCGC CGATCTCCCG CGAGGGGGCG CTCGTCCTCA ACAACCTCTT CCTGTCGGCG
GCCTGCGCCA CGGTGCTGGT CGGCACCCTC TACCCGCTGG TCCTCGAATC CCTGACCGGC
GAGAAGATCT CCGTGGGGGC GCCGTTCTTC AACCTCACCT TCCTGCCGCT CGCGGTGCCC
CTCCTCCTGC TCGTCCCCTT CGGGCAGACC CTGGCCTGGA AGCGGGGCGA CCTCGGGGCG
GCGGCGCAGC GCCTGCTGAT CGGCGTCGGT GCCGGGATCG CGGCGACGCT CGGGATGATC
GCCCTGCGGC GCGGCGGGCC CGCGGCGGCG CCGCTCGGCA TCGGTCTCGG CGCCTACCTG
GTGGTCGGCG CCGCCATGGA GATCGCGACC CGCGCCAAGG GGCGCTCCCT CGGCCTGTCG
CTGCGCCGCG CCGCCGGCCT GCCGCGCTCG GCCTGGGGCA CCGCGATGGC GCATGCGGGC
GTCGGCCTCA CGGTGATCGG CATCGCCGCC CAGGCCTGGA GCGTCGAGGC GCTCGCCACG
GTGCCGCGGG GCGGTCAGCT CACGGCCGGC CCCTACACGG CGACCCTGAG CGGGATCGTG
CCGCGCACCG GGCCGAACTA CACCGAGACC GTGGCCCAGC TCGCGATCCG GGGACCGGAC
GGCGCGCTCG TCGGCACGCT GGACCCCGGC AAGCGCTTCT TCGGCGCCCG CAACATGGCG
GTGAGCGAGG CGAGCCTGCT GACGATCGGG GTGAGCCAGG TCTACGCGAG CGTCGGCGAG
AGCCAGGCGG ACGGCGCGCT CGGCATCCGC CTCTACTACA AGCCGCTGGT GCTGCTGATC
TGGCTCGGCG CCGTGGTGAT GGCGCTCGGC GGCGGGCTCT CCCTCACCGA CCGGCGCTTC
CGGATCGGCG CCCCTGCCCA GCGCCGGGTG CCCGCCGAGT CCGCGCCGGT TCCGGCGGAG
TAG
|
|---|
| Protein sequence | MLIEAGHYAL ALALALSLAQ AVMPAWAARA RDPILRSVAV PAALATFACI AFAFAALTLA
HVRSDFSVLN VFENSHSLKP LVYKISGVWG NHEGSMLLWV LILALFGAIV ALARDSVPAA
LRANTLGVQA TVTFVFLLFI LTTSNPFARL DPAPAEGRDL NPILQDPGLA IHPPLLYLGY
VGFSITFAFA IAALLEGRID AVWARAVRPW TLLAWCFLTV GIAMGSYWAY YELGWGGWWF
WDPVENASLM PWLAGTALIH STVVMEKRDA LKVWTVLLAI LTFSLSLLGT FLVRSGVLTS
VHTFATDPAR GTFILAILVL FIGGSLALFA WRAPLLRQGG IFAPISREGA LVLNNLFLSA
ACATVLVGTL YPLVLESLTG EKISVGAPFF NLTFLPLAVP LLLLVPFGQT LAWKRGDLGA
AAQRLLIGVG AGIAATLGMI ALRRGGPAAA PLGIGLGAYL VVGAAMEIAT RAKGRSLGLS
LRRAAGLPRS AWGTAMAHAG VGLTVIGIAA QAWSVEALAT VPRGGQLTAG PYTATLSGIV
PRTGPNYTET VAQLAIRGPD GALVGTLDPG KRFFGARNMA VSEASLLTIG VSQVYASVGE
SQADGALGIR LYYKPLVLLI WLGAVVMALG GGLSLTDRRF RIGAPAQRRV PAESAPVPAE
|
|---|
| |