Gene M446_4411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4411 
Symbol 
ID6129881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4859757 
End bp4860947 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID641644552 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001771187 
Protein GI170742532 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.510963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.625739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC GTCCCCGCCC GGCCGAACGC GACGCGGTGC CCCTCGCCTC CCCGGCGGCG 
GCGCCGCTGC CGCTGCCGCT GCTGCCGGAG ACCGGCACGC GGCGGCTCTC GCCCCTGAAC
CAGCGCCGGC TCGCCAATTT CCGCGCGAAC CGGCGCGGCT CCTGGTCGTT CGCGATCTTC
TGCGTGCTGT TCGTCGTCAG CCTGTTCGCG GATTTCATCG CCAACGACAA GCCGATCCTG
ATCTTCTACA AGGGCGAGCT GCTGACGCCG ATCTTCGTCG ATTACCCGGA GGAGAAGTTC
GGCGGGTTCC TGGCCCGCAC CGACTACCGC GACCCGGTGA TCCGCAAGGA GATCGCCGAG
AACGGCTGGG CCCTGTGGCC GGCGGTCCGC TTCTCCTACG ACACCCACAA CCTCGACCTG
CCGGTCCCGG CCCCGGCCCC GCCGACCTGG CTCCTCACCG ACGCGCAGTG CCGGACCGTC
GCCGAGAAGG CCGGCGGGCA GGGCTGCCGG GACCTCGAGT GGAACTGGCT CGGGACCGAC
GACCAGGGCC GCGACGTCGT CGCCCGCCTG ATCTACGGTT TCCGCATCTC GGTCCTGTTC
GGGCTCGTCC TGTCGATCAT CTCCTCGGTC GTCGGCGTGC TCGCCGGCGC GGTGCAGGGC
TATTTCGGCG GCTGGATCGA CCTCGTGTTC CAGCGCGTGA TCGAGATCTG GACGGCGATC
CCGTCGCTCT ACCTGCTGAT CATCATCTCG TCGATCATCA CGCCGAGCTT CTTCGTGCTG
CTCGGGATCC TGCTGCTGTT CTCCTGGGTC TCGCTGGTCG GGGTGGTGCG GGCGGAGTTC
CTGCGGGCGC GCAACTTCGA GTACGTGCGG GCGGCGCGGG CGCTCGGCCT GTCCAATGCC
CGCATCATGT TCCGGCACCT GCTGCCGAAC GCCATGGTGG CGACGCTGAC CTTCCTGCCC
TTCGTGCTGA ACGGCTCGAT CTCCACGCTC ACCTCCCTGG ATTTCCTGGG CTTCGGCCTG
CCGCCGGGCT CGCCGTCGCT GGGCGAATTG CTGGCCCAGG GCAAGGCGAA CCTGCAGGCG
CCCTGGCTCG GGCTCACCGG CTTCGCGGTG ATCGCCCTGA TGCTGAGCCT GCTGATCTTC
GCCGGCGAGG CCGTGCGCGA CGCGTTCGAC CCGCGCAAGA CGTTCCGGTA G
 
Protein sequence
MNERPRPAER DAVPLASPAA APLPLPLLPE TGTRRLSPLN QRRLANFRAN RRGSWSFAIF 
CVLFVVSLFA DFIANDKPIL IFYKGELLTP IFVDYPEEKF GGFLARTDYR DPVIRKEIAE
NGWALWPAVR FSYDTHNLDL PVPAPAPPTW LLTDAQCRTV AEKAGGQGCR DLEWNWLGTD
DQGRDVVARL IYGFRISVLF GLVLSIISSV VGVLAGAVQG YFGGWIDLVF QRVIEIWTAI
PSLYLLIIIS SIITPSFFVL LGILLLFSWV SLVGVVRAEF LRARNFEYVR AARALGLSNA
RIMFRHLLPN AMVATLTFLP FVLNGSISTL TSLDFLGFGL PPGSPSLGEL LAQGKANLQA
PWLGLTGFAV IALMLSLLIF AGEAVRDAFD PRKTFR