Gene M446_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3946 
Symbol 
ID6133184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp4394122 
End bp4394823 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID641644105 
Producttwo component transcriptional regulator 
Protein accessionYP_001770746 
Protein GI170742091 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.26309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0241191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAC TTCTGATCGA GGATGACAGC GCCACGGCGC AGAGCATCGA GTTGATGCTC 
AAGTCCGAGA ACTTCAACAC CTATACGACA GATCTCGGCG AGGAGGGCGT CGACCTCGGC
AAGCTGTACG ACTACGACAT CATCCTCCTC GATCTGAACC TGCCCGACAT GTCGGGCTAC
GAGGTGCTGC GGTCGCTGCG CGTCGCCAAG GTGAAGACGC CGATCCTGAT CCTGTCGGGC
ATGGCCGGGA TCGAGGACAA GGTGAAGGGT CTGGGCTTCG GCGCGGACGA CTACCTGACG
AAGCCCTTCC ACAAGGACGA GCTCGTCGCG CGGATCCACG CGATCGTGCG GCGGTCGAAG
GGGCACGCCC AGTCGGTGAT CACCACGGGC GACCTGATCG TCAATCTCGA TCAGAAGACC
GTCGAGGTCT CGGGCGCCCG GGTCCACCTG ACCGGCAAGG AGTACCAGAT GCTGGAACTC
CTCTCGCTGC GGAAGGGCAC GACCCTCACC AAGGAGATGT TCCTCAACCA CCTCTACGGC
GGCATGGACG AGCCCGAGCT GAAGATCATC GACGTCTTCA TCTGCAAGCT GCGCAAGAAG
CTGGCCAATG CCAGCCAGGG CAAGAACTAC ATCGAGACGG TGTGGGGCCG CGGCTACGTG
CTGCGCGAGC CGACCGACGA CGAGGATCGA ATCGCCGTCT GA
 
Protein sequence
MRVLLIEDDS ATAQSIELML KSENFNTYTT DLGEEGVDLG KLYDYDIILL DLNLPDMSGY 
EVLRSLRVAK VKTPILILSG MAGIEDKVKG LGFGADDYLT KPFHKDELVA RIHAIVRRSK
GHAQSVITTG DLIVNLDQKT VEVSGARVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LANASQGKNY IETVWGRGYV LREPTDDEDR IAV