Gene M446_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3550 
Symbol 
ID6133957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3960225 
End bp3961538 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content63% 
IMG OID641643718 
Productmajor facilitator transporter 
Protein accessionYP_001770366 
Protein GI170741711 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0636824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA CAATGTCTGT AGCTATGCAT GCCGGCGGCA TCAAAGAAAA AGCGAAACAA 
GCAACTGGAG CGGCCGTATT CGGCACATTC ATCGAATATT ACGATTTCAG CGTTTATGGG
TATGTGGCGG CGACGCTGTC GCTCGTGTTT TTCCCTGCCG GTGACGCCGT CGCGAACCTG
CTCAACACGC TCGCCGTGTT CGGCCTGGCC TTCCTCGTCC GGCCGATCGG TGCCTGGTAT
TTCGGGCAAC TGGGAGACCG CCGCGGTCGG CGCACCAGCC TGATCGCCAC CATCACGCTC
ATGGGCGTCG CATCCGCGCT CACGGGCTTG CTGCCGAGCT ACCAGACCAT CGGCATTGTA
GCGCCGGTCC TCTTGGTGCT GATGAGGCTG CTGCAGGGGT TCTCGACCGG CGGAGAGATC
GGAGGCGCCG CCTCGTACAT TCGCGAATGG GCGGCGCCGG ATCGTCGTGC CCTTTATATC
TCCTTCCTTC CCTCGGTGGC GCAGCTGGGC AAAGGCCTGG CGGCCGCTCT CGGCGGCCTT
ATGGCGGCCA TGCTGACCCG GGAGAGCATG ATCGAGTGGG GCTGGCGCAT TCCCTTCCTG
CTGGCTGGTC CTTTGGCGGT CCTGACGATC TGGATGCGCC TGAGCATCGA GGACAGCCCG
GAATTCGCGG CGCTGTCCGC TTCGCACAAG ACGACCAAGG CCCCGCTCGC GAGCCTGTTC
CAGCAGTACC CGACCGCCCT AGCCAAGGTG ATGCTGATCT CGGCCGTCCA GAACATCGGC
ACCTATATCG GAACGGTGTT CGTATCCGTG TATTTCAGCG AGGTACTGGG CTTCAGCAAG
GCGGAAGCCG CCACGGTCGT GCTGCTGGCC GTTATCCTGG CGTCGTTCCT GATCCCGCTC
GCCGGGATGA TCGGCAACCG GGTTGGCGGA AAGACCCTGC TGCTCATTGC CTACACGGCG
TACTTGCTGC TCACCCTCCC TGAATTCATG CTGATGAACC AGAACAATAT CGTGCTGGCG
CTCCTTGGCC TGTCCATCGG GATCATCCCC TACGCCCTGT GCCAAGCGGG CACCTACGCC
ACGATGCCAG AGATGTTCCC GACCCAGATC CGGCATACGG GCGTTGCCTT CGGGCACAGC
GTCGGTGCGG TTGTCGGCGG CGGCGGCGGC CCGTATTTCG CGGCTTGGCT CATCAGCGTC
ACGGGCAACA CCTACATGCC GGCATATATC CTGATGGGAG CGGGCCTCGT CGGTCTTGTT
GTGGTCGGCC TGACCGTGCG CCGCAACGTG GGTGGCACTC ACCTCTACGC CTAG
 
Protein sequence
MSDTMSVAMH AGGIKEKAKQ ATGAAVFGTF IEYYDFSVYG YVAATLSLVF FPAGDAVANL 
LNTLAVFGLA FLVRPIGAWY FGQLGDRRGR RTSLIATITL MGVASALTGL LPSYQTIGIV
APVLLVLMRL LQGFSTGGEI GGAASYIREW AAPDRRALYI SFLPSVAQLG KGLAAALGGL
MAAMLTRESM IEWGWRIPFL LAGPLAVLTI WMRLSIEDSP EFAALSASHK TTKAPLASLF
QQYPTALAKV MLISAVQNIG TYIGTVFVSV YFSEVLGFSK AEAATVVLLA VILASFLIPL
AGMIGNRVGG KTLLLIAYTA YLLLTLPEFM LMNQNNIVLA LLGLSIGIIP YALCQAGTYA
TMPEMFPTQI RHTGVAFGHS VGAVVGGGGG PYFAAWLISV TGNTYMPAYI LMGAGLVGLV
VVGLTVRRNV GGTHLYA