Gene M446_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3521 
Symbol 
ID6130272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3926948 
End bp3927658 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content74% 
IMG OID641643690 
ProductABC transporter related 
Protein accessionYP_001770338 
Protein GI170741683 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.295541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.330218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC GCCCGGTCGT CCTGGAGGCC CGCGACCTGG AAGCCTGGTA CGGCGAGAGC 
CAAGCCCTGT TCGGCATGTC GCTCACGGTG CGCGAGGGCG AGTGCGTCAC GCTGATCGGC
CGCAACGGCG CGGGGCGCAC CACCGCCCTG AGGGCGATCC TCGGCCTCAC CGACCGGCGG
GCCGGCTCGG TGCGGGTGCG GGGCGAGGAG GTGATCCAGC GCCCGCCCCA CCGCATCGCC
CGCCTGGGGA TCGGCTACTG CCCGGAGGAG CGCGGCGTCT ACCGGACGCT GACCACCCGC
GAGAACCTCA CCCTCCTGCC CCGGCTCGGG ACGCAGGGTC TCGCGCTGCC CGAGGTGCTG
GGCCTCTTTC CCAACCTCGC CGAGCGGCAG GACAGCTATG GCGGGCAGCT CTCGGGGGGC
GAGCAGCAGA TGCTGGCCCT CGGCCGCATC CTCGTCACCG GCGCCCGGAT CCTGCTCCTC
GACGAGATCA CCGAGGGTCT CGCGCCGGTG ATCGTCGAGG CGCTGGGGCG GGCGGTGGCG
CTGCTCAAGA GCCGCGGCTT CACCATCGTG CTCGTCGAGC AGAACTTCCA CTTCGCCCGC
TCCCTCGCCG ACCGCCACTA CGTGGTGGAG CACGGCCGCG TCGCCGCGGA GATCCCGGCC
GAGGCGGTCG CCGCGCGGGA GGAGGAGGTC GCGCAGCTCC TCGGCGTCTG A
 
Protein sequence
MAERPVVLEA RDLEAWYGES QALFGMSLTV REGECVTLIG RNGAGRTTAL RAILGLTDRR 
AGSVRVRGEE VIQRPPHRIA RLGIGYCPEE RGVYRTLTTR ENLTLLPRLG TQGLALPEVL
GLFPNLAERQ DSYGGQLSGG EQQMLALGRI LVTGARILLL DEITEGLAPV IVEALGRAVA
LLKSRGFTIV LVEQNFHFAR SLADRHYVVE HGRVAAEIPA EAVAAREEEV AQLLGV