Gene M446_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3297 
Symbol 
ID6133851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3653995 
End bp3654945 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content74% 
IMG OID641643484 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001770136 
Protein GI170741481 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.126108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TCGCGGTGAT CGGGGCCGGC CTGATGGGGC ACGGCATCGC GCTGGTCCTG 
GCCCTCGGCG GGCACGGGGT GCGCCTGACC GACAGCCGGG CCGAGGCCCT GGAGCGGGTG
CCGGGCCTGA TGGGCTCGGC CCTCGCCACC TTGCGGGAGG CGCAGGCCGT CGCGGCGGAG
TGGACGCCCG AGCGGCTGGA GGCGGCCGTG CGCCTGTCGC CGGACCTCGC CGGGACGGTG
GCAGGGGCGG ACCTCGTCAT CGAGGCGATC ACCGAGAACC CGGAGGCCAA GCGGGCGCTC
TTCGCCGAAC TCGACCGGCT CTGCGCCCCC GGCACGATCC TGGCCAGCAA CACGAGCTAC
CTCGACGTCT TCCCGCTGAT CCCGGAGGCC CGGCAGGCGC GGGCCCTCGT CGCGCATTGG
TACACGCCGC CCTACATCGT CGACCTCGTC GACGTGGTAC CGGGGCCGCG GACCGATCCG
GCCGTGGTCG AGACGATGCG CGAGCTCGTC CTCGGCCTCG GCCAGGTCCC GATCGTCCTC
AAGCGCTTCG TGCCGGGCTA CGTCGCCAAC CGTATCCAGT CGGCGATCTC GGCGGAGGTC
TACCACCTCC TCGACGAGGG GCTCGCCTCG CCGCGGGACA TCGACGACGC GATCATCCAC
GGGCTGGCCC TGCGCATCCC GGTCCTCGGC CACCTCGCCA AGGCCGACTT CACTGGGATC
GAGCTCCTGC GCCACGCGCT GGCCAATGCG AGCTACAGCC CGCCCCCGGC CCGCACCGCC
TCGCCGGCCC TCGACGCGCT GGCGGCGGAG GGGCGCACGG GCGTGATGGC GGGGCACGGC
TTCTTCGACT GGGGCGGGCG CGACCCGGCC GAGCTGTTTC GCGACCGCGA CCGGCGGCTG
CTCGCCCTGA AGCGGGCGAT GCGCGAGATC GGGCGGATGG AGGGGCGCTG A
 
Protein sequence
MSEIAVIGAG LMGHGIALVL ALGGHGVRLT DSRAEALERV PGLMGSALAT LREAQAVAAE 
WTPERLEAAV RLSPDLAGTV AGADLVIEAI TENPEAKRAL FAELDRLCAP GTILASNTSY
LDVFPLIPEA RQARALVAHW YTPPYIVDLV DVVPGPRTDP AVVETMRELV LGLGQVPIVL
KRFVPGYVAN RIQSAISAEV YHLLDEGLAS PRDIDDAIIH GLALRIPVLG HLAKADFTGI
ELLRHALANA SYSPPPARTA SPALDALAAE GRTGVMAGHG FFDWGGRDPA ELFRDRDRRL
LALKRAMREI GRMEGR