Gene M446_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2749 
Symbol 
ID6135083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3056880 
End bp3057917 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content72% 
IMG OID641642962 
Productpolyprenyl synthetase 
Protein accessionYP_001769621 
Protein GI170740966 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0535555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.102238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGTCG TCATCCCCCT CGAAGACACC TCCTCCGATC CGGAGGCGAG CCTCAACGAC 
CTCGTCGCGC TGGTCGCGAG CGGGATGGAG CGGGTGAACG CGATGATCCT GTCGCGCACC
GGCTCGGACG TCGCGATGAT CCCGGAGGTG GCCAACCACC TGATCGCCTC GGGCGGCAAG
CGCCTGCGGC CGATCCTGAC GCTCGCGACG GCCCAGCTCT GCGGCTACCG GGCGGGGGAG
GCCGGCCGCG ACGGCGACGT GAAGCTCGCC GCCAGCGTCG AGTTCATGCA CACGGCGACG
CTCCTGCACG ACGACGTGGT GGACGAGAGC GACATGCGCC GCGGCCGCGT CGCCGCGCGG
ATCAAGTGGG GCAACCAGGC GAGCGTGCTG GTCGGCGACT TCCTGCTCGG CCAAGCCTTC
AAGATGATGG TGGAGGTGGG CAGCCTGCGC GCCCTCGACA TCCTCTCCTC GGCCGCCGCG
GTGATCGCCG AGGGCGAGGT GATGCAGCTC GGCGCGGCCA AGAACACCGA GACGACCGAG
GACGAGTACC TGGCGGTGAT CCGCGCCAAG ACCGCGGAGC TGTTCGCGGC GGCCTGCGAG
GTCGGCCCGG TCCTGGCGGA GCGGCCGAAA TCCGAGGCGG CGGCCTGCCG CAGCTACGGG
ATGAATCTCG GCGTCGCCTT CCAGCTGATC GACGACGCCC TCGATTACGG CGGCACCAGC
GCGGCGCTCG GCAAGAACGT CGGCGACGAT TTCCGCGAGG GCAAGATCAC GCTGCCGGTC
GTGCTGTCCT TCCGGCGCGG CTCGGCGGAG GAGCGCGCCT TCTGGCGCCG CACCCTGGAA
CAGGGCGAGA TCGACGAGGC GCGCGACCTC GACACCGCGA TCGGCATCAT GCGCCGCCAC
CGGGCCCTGG AGGACACGGT CGAGCGGGCG CGCCACTACG GGGCCATCGC CCGCGACGCG
CTGGCGCTCT TCCCCGACGC GCCGATGAAG CGGGCGCTGC TGCAGGCCGT GGATTTCTGC
ATCGCCCGGG CGCGCTGA
 
Protein sequence
MGVVIPLEDT SSDPEASLND LVALVASGME RVNAMILSRT GSDVAMIPEV ANHLIASGGK 
RLRPILTLAT AQLCGYRAGE AGRDGDVKLA ASVEFMHTAT LLHDDVVDES DMRRGRVAAR
IKWGNQASVL VGDFLLGQAF KMMVEVGSLR ALDILSSAAA VIAEGEVMQL GAAKNTETTE
DEYLAVIRAK TAELFAAACE VGPVLAERPK SEAAACRSYG MNLGVAFQLI DDALDYGGTS
AALGKNVGDD FREGKITLPV VLSFRRGSAE ERAFWRRTLE QGEIDEARDL DTAIGIMRRH
RALEDTVERA RHYGAIARDA LALFPDAPMK RALLQAVDFC IARAR