Gene M446_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2109 
Symbol 
ID6130222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2360661 
End bp2362277 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content77% 
IMG OID641642337 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001769005 
Protein GI170740350 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.839474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.02273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC ACGACGTCCT CAACCAGAGC ACGCCTTTCG CGGACGTGAA CCTGATCGCC 
GCCGACGCGC CCCTGCGGGG CGCCCTGCGG GCGAACGGGG TCGATCCCGA CGAGCCCGGG
CTGGCCGCCT TCGGGGCGGA GTGGGGCGCG GCGGAGCGCC TCGAGGGCGG CCGCCTCGCC
AACGAGAATC CGCCGCGGCT GCGCACCCAC GACGCGAGCG GCCGCCGCGC CGACCGGGTG
GAGTTCCACC CCGCCTATCA CGCCCTGATG CGGGCGAGCG TGGGGGCGGG CCTGCACGCC
TCGCTCTGGG ACGGCGCGGC GCCGGCCCTG CCGTTCGGCC GGGGCCACGT GGCGCGGGCC
GCCCGCCTCT ACGCCGTCGC GGGTGTCGAG AGCGGCCATC TCTGCCCCAT GACCATGACC
AGCGCCGCGG TGGCGGCCCT CGCCGCCGCG CCCGACCACC TCGCCGCGTG GTGGCCGCGC
CTCACCTCCC GCCGCTACGA TCCGGAGTTC CGGCCGTGGT TCGAGAAGGC GGGCGTCACC
CTCGGCATGG GGATGACGGA GAAGCAGGGC GGCACGGACG TGCGCGCCAA CACCACGGCG
GCGCGGCCCG CGGGCGACGA CGTCTACCAC CTCACCGGGC ACAAGTGGTT CTTCTCGGCC
CCGATGTGCG ACGCCTTCCT GGTCCTGGCG CAGGCTCCCG ACGGGCTCTC CTGCTTCCTG
GTGCCCCGGC ACCGGCCCGA CAGGAGCGTC AACGCCCTGC GGCTGCAGCG CCTGAAGGAC
AAGCTCGGCA ACCGCTCGAA CGCCTCCGCG GAGGTCGAGT TCGAGGAGGC CTTCGGCTGG
CGCCTCGGCG AGGAGGGGCG GGGGCTGCGC ACCATCCTGG CGATGGTGCA GCTCACGCGG
CTCGACTGCG CGGTGGCCTC GGCCGGGCTC GGCCGCATGG CCCTCGCGCT TGCGCTCCAC
CACGCCCGCC ACCGCAGCGC GTTCGGGCGG CCCCTCGCCG ACCAGCCCGC CATGCGGGCG
GTGCTGGCGG ATCTCGCCCT CGCCGTCGAG GCGCAGGTCG CCCTCGTGAT GCGGCTCTCC
GCCAGTTTCG ACCGGGGCGA GGCGGTCCGC GCCCGTCTGC TCACCCCCGC CGCGAAGTAC
GCGGTCTGCA AGGCGGCGCC CGGCCTCGTC GCCGAGGCGA TGGAGTGCCT CGGCGGCAAC
GGCTACGTGG AGGAGAATCC GCTCCCCCGC CTCTACCGCG AGGCGCCGGT CAACGCGATC
TGGGAGGGGT CGGGCAACGT CATGGCCCTC GACGTGCTGC GCGCGGCCTC CCGCGCGCCC
GAGGAGGCGC GGGCCGTCCT CGCCGCGCTC GCGGCGGAGG CGCGGGACCT GCCGGGCGCC
GCCCGGGCCG CCCGCGACGT GGCGGAGGGC CTCGCGGCGC CGGACGCGCC GGCGCGGGCG
CGCTTCGTCA CCGGGCGCCT CGCCGCCCTC GCGGCGGCGG CGGCCCTGGC GACCTCAGCG
CCCCCCGCCC TCGCCGAGGC CTATGCGCGC ACGCGCCTCG CCGGGGAGCA TGCCCTCTTC
GGCAGCGCGG ATCTCGGGCG GGAGGCGGAC CTCCTGCTCG CCCGCGCCCT CCCGTGA
 
Protein sequence
MATHDVLNQS TPFADVNLIA ADAPLRGALR ANGVDPDEPG LAAFGAEWGA AERLEGGRLA 
NENPPRLRTH DASGRRADRV EFHPAYHALM RASVGAGLHA SLWDGAAPAL PFGRGHVARA
ARLYAVAGVE SGHLCPMTMT SAAVAALAAA PDHLAAWWPR LTSRRYDPEF RPWFEKAGVT
LGMGMTEKQG GTDVRANTTA ARPAGDDVYH LTGHKWFFSA PMCDAFLVLA QAPDGLSCFL
VPRHRPDRSV NALRLQRLKD KLGNRSNASA EVEFEEAFGW RLGEEGRGLR TILAMVQLTR
LDCAVASAGL GRMALALALH HARHRSAFGR PLADQPAMRA VLADLALAVE AQVALVMRLS
ASFDRGEAVR ARLLTPAAKY AVCKAAPGLV AEAMECLGGN GYVEENPLPR LYREAPVNAI
WEGSGNVMAL DVLRAASRAP EEARAVLAAL AAEARDLPGA ARAARDVAEG LAAPDAPARA
RFVTGRLAAL AAAAALATSA PPALAEAYAR TRLAGEHALF GSADLGREAD LLLARALP