Gene M446_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2023 
Symbol 
ID6129490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2257462 
End bp2258040 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content79% 
IMG OID641642253 
Productpeptidase A24A prepilin type IV 
Protein accessionYP_001768921 
Protein GI170740266 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.674967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.217892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGCAG CTGATCCGAC GGGCACCGCC GCGCTCGCGC GCAGGGCCGG GCGCCTCGTC 
CTGCCCGGGG TGGCCCTCGC CCTCGCCCCG ACCCTGTGGC TCGGCTCGCC CGAGGCGCTG
AGCCTCGTCC TCGCCCTCGC GCTCCTCGCC GCGGTGGCGC AGGTCGTCTG GCAGGACGTG
GTCAGCCTCA CCATCGCGGA CGGCACCGTC GCGGCGATCG GGCTCGTCGC CGCGGCGGCG
CGCCTGGGCG CCGGGGAGCC GCGCGCCGAG GCGGCGGCGC TCGCGGTCGA CGGCCTCGTC
TGCGGCGGCG GCCTCTGGCT GATCCGCGAG GCCTATTACC GCCGGCGCGG CCATGACGGC
ATCGGCCTCG GCGACGTGAA GCTCGCGGCG GCGGGGGGAC TCCTCACCGG GCTCGAAGGC
TTCGCCTGGG CGCTGCTGCT GGCGAGCCTC GGCGGGCTCG CGGTCGTGGC CGCGAGCCGC
CTGCGGGCGC GCCCGATCGG CCGCGGGGAC AAGATCCCGT TCGGGGCCTT CCTGGCGCCG
GCCCTCCTCG CCGTCTGGTT CGCGGGCGGG CCGCCGTGA
 
Protein sequence
MHAADPTGTA ALARRAGRLV LPGVALALAP TLWLGSPEAL SLVLALALLA AVAQVVWQDV 
VSLTIADGTV AAIGLVAAAA RLGAGEPRAE AAALAVDGLV CGGGLWLIRE AYYRRRGHDG
IGLGDVKLAA AGGLLTGLEG FAWALLLASL GGLAVVAASR LRARPIGRGD KIPFGAFLAP
ALLAVWFAGG PP