| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1803 |
|---|
| Symbol | |
|---|
| ID | 6132382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 2019837 |
|---|
| End bp | 2020625 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641642054 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001768723 |
|---|
| Protein GI | 170740068 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.225984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC CCGCCCGCAC CGCCCTCGTC ACCGGCGCCG CCCGCGGCAT CGGGCTCGCG
ACGGCGCGGC TCTTCCTGCG CGACGGCTGG CGGGTGGCGC TCCTCGACAT CGACGCCGAG
GGCTTGGCCG CGGCCGCGTC GGGGCTCGAC GCGCCCGAGC GCGTCCTCGC CCTCACCTGC
GACGTCTCCG ACGAGGCCGG GGTCGAGCGG GCGGTGGCGG CCACGGCCGA CCGCTTCGGC
CGGCTCGACG CCCTGGTGAA CAATGCCGGG GTCGCGGTGT TCAAGCCGCT CCTCGACACG
AGCCCGGCCG AGTGGGCGCG CGTGCTCGCG GTGAACCTCA CCGGGCCGTT CCTCTGCGCC
CGGGCCGCCG CGCCGGTGAT GGCCCGCACG GGCGGCGGGG GGATCGTCAA CATCACGTCG
ATCTCGGGGC TGCGCGCCTC GACCCTGCGC GTCGCCTACG GAACCAGCAA GGCGGGGCTC
GCCCACCTGA CCAAGCAGCA GGCAGTCGAG CTCGCCGGGC TCGGCATCCG GGTCAACGCC
GTCGCCCCCG GCCCGGTCGA CACCGCCATG GCGAAGGCCG TGCACAGCCC GGCGATCCGC
GCCGACTACC ACGACGCGGT GCCGCTCAAC CGCTACGGGC TGGAGGAGGA GATCGCCGAG
GCGATCCTGT TCCTCGCCGG TCCGCGGGCC GCCTACGTGA CCGGCCAGAT CCTGGCGGTG
GATGGCGGGT TCGACGCCGC CGGGATCGGG CTGCCGACGC TCAGGCGGGC GGCGGGCGCG
CGGGAGTGA
|
|---|
| Protein sequence | MTEPARTALV TGAARGIGLA TARLFLRDGW RVALLDIDAE GLAAAASGLD APERVLALTC
DVSDEAGVER AVAATADRFG RLDALVNNAG VAVFKPLLDT SPAEWARVLA VNLTGPFLCA
RAAAPVMART GGGGIVNITS ISGLRASTLR VAYGTSKAGL AHLTKQQAVE LAGLGIRVNA
VAPGPVDTAM AKAVHSPAIR ADYHDAVPLN RYGLEEEIAE AILFLAGPRA AYVTGQILAV
DGGFDAAGIG LPTLRRAAGA RE
|
|---|
| |