Gene M446_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1642 
Symbol 
ID6132826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1834971 
End bp1836143 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content73% 
IMG OID641641900 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001768569 
Protein GI170739914 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0656579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACAAGC CGCTCGCGGG AATCAGGGTG CTCGAACTCG CCCGCATCCT CGCCGGGCCC 
TGGATCGGCC AGCTCCTGGC GGATCTCGGG GCCGACGTCG TCAAGGTCGA ACGGCCGGGG
GTCGGGGACG ACACCCGCGC CTGGGGCCCG CCCTTTGTGG AGGCGGCGGA GGGCGGCACC
CTCTCGGCCT CCTACTTCCA CTCGACGAAT CGCGGCAAGC GCTCGGTCGC GGCGGATTTC
GAGACCGAGG AGGGCCGCGC CGTGGTGCGC CGGCTCGCCG CCCACGCCGA CGTGATGATC
GAGAACTTCA AGGTCGGCGG CCTCAGGAAG TACGGGCTCG ACCACGAGAG CCTGCGGGCG
CTCAACCCGC GCCTCATCAC CTGCTCGGTG ACCGGCTTCG GCCAGGACGG ACCCTACGCG
CCGCGCGCCG GCTACGACTT CATGATCCAG GGCCTCGGCG GGATCATGTC GCTCACCGGC
GAGCCCGCGG GCGAGCCGGT GAAGACCGCG GTCGCCTTCG CGGACGTGTT CACGGGCGTC
TACGGGGCGA CGGCGATCCT CGCCGCCCTC CAGGGCCGCC ACGCCACCGG CGAGGGCTGC
CACGTCGACA TGGCGCTGCT CGACACCCAG GTCTCGGTGC TCGGCAACCA GGCGCTGGTC
TACCTCGTCT CGGGCCAGCT GCCGCCGCGG ATGGGCAACG AGCACACTAG CATCGTGCCC
TACCAGGTCT TCCCGGCCGC CGACGGCCAC GTCATCGTGG CCTGCGGCAA TGACGGGCAA
TTCGCCAAGC TCTGCGGCGT GCTCGGCACC GCGTGGCACC GGGACCCCGC CTACGCCACC
AACCCGGCGC GGGTGACGAA CCGGGCCGTG CTGATCCCGC TGATCGCCGC CGAGACCAGC
CGCCACCCGA AGGCGGAGCT GCTGGCGCGG CTCACCGCTG TCAACGTGCC GGTCGGGCCG
ATCAACGACC TCGCGGAGGT CTTCGCCGAC CCCCAGGTGC GGCACCGGGG CCTGCGGGTC
GACCTGCCCG AGCCGCGCGC CAAGGGCGGC CACGTGCCGA GCGTGCGCTC GCCGATCGTG
ATCGACGGCG TGCCCATGGT GGCGGACGCC GCCTCGCCGC AGGTGGGGGA TCACACGCGG
AGCGTCCTCG ACGACCCGGC CTGGGGCGGG TGA
 
Protein sequence
MHKPLAGIRV LELARILAGP WIGQLLADLG ADVVKVERPG VGDDTRAWGP PFVEAAEGGT 
LSASYFHSTN RGKRSVAADF ETEEGRAVVR RLAAHADVMI ENFKVGGLRK YGLDHESLRA
LNPRLITCSV TGFGQDGPYA PRAGYDFMIQ GLGGIMSLTG EPAGEPVKTA VAFADVFTGV
YGATAILAAL QGRHATGEGC HVDMALLDTQ VSVLGNQALV YLVSGQLPPR MGNEHTSIVP
YQVFPAADGH VIVACGNDGQ FAKLCGVLGT AWHRDPAYAT NPARVTNRAV LIPLIAAETS
RHPKAELLAR LTAVNVPVGP INDLAEVFAD PQVRHRGLRV DLPEPRAKGG HVPSVRSPIV
IDGVPMVADA ASPQVGDHTR SVLDDPAWGG