Gene M446_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1444 
Symbol 
ID6131947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1586210 
End bp1587769 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content70% 
IMG OID641641724 
Product2-isopropylmalate synthase 
Protein accessionYP_001768394 
Protein GI170739739 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.274001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CTGCTTCCTC CGCCGAGCGC GTCCTGATCT TCGACACTAC CCTGCGCGAC 
GGCGAGCAAT GCCCCGGCGC CACCATGACC TTCGAGGAGA AGCTCGCGGT GGCCGAGATG
CTCGACGGGA TGGGCGTCGA CATCATCGAG GCGGGTTTCC CGATCGCCTC GAACGGCGAT
TTCGAGGCGG TGACCGAGAT CGCGCGGCGC ACCAAGCGCG CCGTGGTGGC GGGCCTCGCC
CGGGCGATCC CCGCCGACAT CGCGCGGGCC GGGGAGGCGG TGCGGCCCGC CGCGCGCGGG
CGCATCCACA CCTTCGTGTC GACGTCGCCG ATCCACCTCG CCCACCAGAT GCGCAAGAGC
GAGGAGGAGG TGCTGGAGAT CATCCAGCGG ACGGTGGCCC AGGCCCGCGA CCTCGTCGAG
GACGTGGAAT GGTCGGCCAT GGACGCGACG CGCACGCCGC TCGACTACCT GTGCCGCTGC
GTCGAGACGG CGATCCGGAT GGGGGCGACC ACGATCAACC TGCCGGACAC GGTCGGCTAC
GCGACGCCCG ACGAGTACCG GGCGATGTTC CGCGCGGTGC GCGAGCGGGT GCCCAACGCC
GACAAGGCGG TCTTCTCGGT GCATTGCCAC AACGACCTGG GACTGGCGAT CGCGAACTCC
CTCGCGGGCG TGGAGGGCGG CGCGCGCCAG ATCGAGTGCA CGATCAACGG CATCGGCGAG
CGGGCGGGCA ACGCGGCGCT CGAAGAGGTG GTGATGGCGA TCCGCACCCG CGGCGACGTG
CTGCCCTACG CCACCGGCAT CGACACGACG CAGATCATGC GGGCCTCGAA GCTGGTGGCG
GCCGCGACGC ATTTCCCGGT CCAGTACAAC AAGGCGATCG TCGGCCGGAA CGCCTTCGCG
CATGAGAGCG GCATCCACCA GGACGGGATG CTCAAGAACC AGTCCACCTA CGAGATCATG
ACCCCGGAAT CGGTCGGGGT TCAGAAGACC TCGCTGGTAA TGGGCAAGCA CTCGGGCCGC
GCGGCCTTCC GCTCGAAGCT GGAGGAGATG GGCTACCGCC TGTCGGACAA CCAGTTCCAG
GACGCGTTCG AGCGGTTCAA GGCGCTCGCC GACCGCAAGA AGAACGTCTA CGACGAGGAC
ATCGAGGCGC TGGTCGACGA GAACCTCGCG ACCGCGCACG ACCGCATCCG GCTGGTGTCG
CTGACGGTGA TCGCGGGCAC GCGCGGCCCC CAGCGGGCGA CGATGCGCCT CGACATCGAG
GGGCGCCTCG CGACGGAGGA GGCGGACGGC AACGGACCGG TCGACGCGGT CTTCAACGCG
ATCCACGCCC TGGTGCCGCA CGAGGCGAAG CTCGAGCTCT ACGACGTCCA CGCGGTGACG
GAGGGCACGG ACGCGCAGGC CGAGGTGTCG GTGCGCCTGC GCCAGGGCGA GCGCAGCGTG
ACGGCGCGCG GCGCCGACCC GGACACGCTG GTCGCCTCCG CGAAGGCCTA CCTGGCGGCG
CTGAACAAGC TGCTGGCGGG CGCCAACCGC CTGCATGCCC AGCATGCGGC GGCCGAATAG
 
Protein sequence
MTQAASSAER VLIFDTTLRD GEQCPGATMT FEEKLAVAEM LDGMGVDIIE AGFPIASNGD 
FEAVTEIARR TKRAVVAGLA RAIPADIARA GEAVRPAARG RIHTFVSTSP IHLAHQMRKS
EEEVLEIIQR TVAQARDLVE DVEWSAMDAT RTPLDYLCRC VETAIRMGAT TINLPDTVGY
ATPDEYRAMF RAVRERVPNA DKAVFSVHCH NDLGLAIANS LAGVEGGARQ IECTINGIGE
RAGNAALEEV VMAIRTRGDV LPYATGIDTT QIMRASKLVA AATHFPVQYN KAIVGRNAFA
HESGIHQDGM LKNQSTYEIM TPESVGVQKT SLVMGKHSGR AAFRSKLEEM GYRLSDNQFQ
DAFERFKALA DRKKNVYDED IEALVDENLA TAHDRIRLVS LTVIAGTRGP QRATMRLDIE
GRLATEEADG NGPVDAVFNA IHALVPHEAK LELYDVHAVT EGTDAQAEVS VRLRQGERSV
TARGADPDTL VASAKAYLAA LNKLLAGANR LHAQHAAAE