Gene M446_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1318 
Symbol 
ID6134638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1451140 
End bp1452867 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content73% 
IMG OID641641599 
Productdihydroxy-acid dehydratase 
Protein accessionYP_001768270 
Protein GI170739615 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.135664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG ACGCGGGCAA GGGGTTGCGC AAGGGGCTCA CGAGCTACGG CGACGCGGGC 
TTCTCGCTGT TCCTGCGCAA GGCCTTCATC AAGGCCATGG GCTATTCCGA CGACGCGCTG
AACCGGCCGA TCGTCGGCAT CACCAACACC TTCAGTGACT ACAATCCCTG CCACGGCAAC
GCCCCGGCCC TGATCGAGGC GGCCAAGCGC GGCGTGATGC TGGCGGGCGC CATGCCGATG
GTGTTCCCGA CCATCTCGAT CCACGAGAGC TTCGCCCACC CGACCTCGAT GTTCCTGCGC
AACCTGATGG CGATGGACAC CGAGGAGATG ATCCGCGCCC AGCCGATGGA CGCCGTCATC
GTGATCGGCG GCTGCGACAA GACCCTGCCG GCCCAGATCA TGGCCGCGGC GAGCGTGGAC
CTGCCGACCG TGGTGATCCC GGTCGGCCCG ATGGTGGTCG GGCACCACAA GGGCGAGGTG
CTGGGCGCCT GCACGGATTG CCGCCGGCTC TGGGCCGCGC ACCGGGCCGG CGAGATCGAC
GAGGCCGAGA TCGAGGTGGT GAACGGGCGG CTCGCCCCCT CGGTCGGCAC CTGCATGGTG
ATGGGCACGG CCTCCACCAT GGCCTGCATG ATCGAGGCGA TGGGCCTCGC CCTGCCCTAC
GCGGGCACGA TCCCGGCGCC GCATGCCGAG CGGGTGCGCC TCGCCGAGGC GAGCGGCCGC
CGCGCCGCCG CGATGGCGGT GGCGGGCGGG CCCCGCCCGA GCGCGCTCCT GACGCCCGCG
AGCCTGCGCA ACGCGCAGGT GGTGCTGCAG GCGATCGGCG GCTCGACGAA CGGGCTCATC
CACCTCACCG CGATGGCGAA CCGGGTCGGG GCGAGGATCG ACCTCGACGC CTTCGACGCG
GTCGGGCGCG AGGTGCCGGT CCTGGTCGAC CTCAAGCCCT CCGGCGCGCA TTACATGGAG
CATTTCCACC ACGCCGGCGG TGTGCCGAAG CTCCTGCGCG AACTCGGCGA CCTCATCGAC
CTCGACGCCC CGACCGTGGC GGGCGGCTGC CTGCGCGACG TGGTGGCGGC GGCCGAGGAG
GTGCCGGGCC AGACCGTCAT CCGCTCGCCC GCCGACCCGA TCAAGGCGGC GGGCGGTCTC
GCGGTGCTGC GCGGCAACCT CGCGCCGCGC GGGGCGCTGA TCAAGCACGC GGCGGCGAGC
CCGCGGCTCC TGCAGCACAC CGGCCGGGCC GTGGTGTTCG AGTCGATCCC CGACATGGCG
GCGCGGATCG ACGCGCCGGA CCTCGACGTC GGGGCCGACG ACGTGCTGGT CCTGCGCAAT
GCCGGCCCGA AGGGCGCGCC CGGGATGCCG GAGGCCGGCT ACCTGCCGAT CCCGAAGAAG
CTCGCCCGGC AGGGCGTCAA GGACATGGTG CGGATCTCCG ACGCCCGGAT GAGCGGCACC
GCCTTCGGCA CGATCGTGCT CCACGTCACG CCGGAATCGG CGGTGGGCGG CCCGCTCGCG
CTGGTGCGCA CGGGCGACGC GATCCGCCTC GACGTGGCCG GGCGGCGCAT CGACCTCCTG
GTGGACGAGG CGGAGCTGGC GCGCCGGCAG GCCGCCCTGC CCGAAGCCCC GCGCCCGGCC
TGGGCGCGGC GCGGCTACGC CCGCCTGTTC CACGACACGG TCACGCAGGC CGACGAGGGC
TGCGACTTCG CCTTCATGGC CCCGGACGGC GGCGCGACGG AGGAGTGA
 
Protein sequence
MAGDAGKGLR KGLTSYGDAG FSLFLRKAFI KAMGYSDDAL NRPIVGITNT FSDYNPCHGN 
APALIEAAKR GVMLAGAMPM VFPTISIHES FAHPTSMFLR NLMAMDTEEM IRAQPMDAVI
VIGGCDKTLP AQIMAAASVD LPTVVIPVGP MVVGHHKGEV LGACTDCRRL WAAHRAGEID
EAEIEVVNGR LAPSVGTCMV MGTASTMACM IEAMGLALPY AGTIPAPHAE RVRLAEASGR
RAAAMAVAGG PRPSALLTPA SLRNAQVVLQ AIGGSTNGLI HLTAMANRVG ARIDLDAFDA
VGREVPVLVD LKPSGAHYME HFHHAGGVPK LLRELGDLID LDAPTVAGGC LRDVVAAAEE
VPGQTVIRSP ADPIKAAGGL AVLRGNLAPR GALIKHAAAS PRLLQHTGRA VVFESIPDMA
ARIDAPDLDV GADDVLVLRN AGPKGAPGMP EAGYLPIPKK LARQGVKDMV RISDARMSGT
AFGTIVLHVT PESAVGGPLA LVRTGDAIRL DVAGRRIDLL VDEAELARRQ AALPEAPRPA
WARRGYARLF HDTVTQADEG CDFAFMAPDG GATEE