Gene M446_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1194 
Symbol 
ID6133774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1315581 
End bp1316315 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content71% 
IMG OID641641482 
ProductMIP family channel protein 
Protein accessionYP_001768153 
Protein GI170739498 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.281003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GCAAGTGCGC GGCCGAAGCC ATCGGCACGT TCTGGCTCAC CTTCGCCGGC 
TGCGGCAGCG CCGTCGTCGC GGCGGCCTTC CCGCAGGTCG GCATCGGCCT GCTCGGCGTG
TCGCTGGCCT TCGGCCTGAC CGTGGTGACC ATGGCCTACG CCATCGGCCA CATCTCGGGC
TGCCATCTCA ACCCGGCGGT CACGTGCGGG CTCGCCGCGG GCGGACGCTT CCCAGCACGC
GAGATCCCCC CTTACGTGGT CTCGCAGGTC ATCGGCGGGA TCGCCGCCGC GGCGCTGCTC
TACGCAATCG CGAGCGGCGC GCCCGACTTC GACGCGGCGA AGGGATTTGC CGCGAACGGT
TACGGCGACC ACTCGCCGGG GCATTACGGC CTGGTCTCCT GCCTCATGGC CGAGGTGGTG
CTCACGATGA TGTTCCTGTT CATCATCATG GGGGCGACCC ACGGCAAGGC GCCGGTCAGC
TTCGCGCCCC TCGCAATCGG CTTCGCGCTG ACGCTGGTCC ACCTCGTCGG CATCCCGGTC
ACGAACCTCT CGGTGAACCC GGCCCGCAGC ACGGGCCCCG CCCTTTTCGC CGGAGGCTGG
GCCGTCGGGC AGCTCTGGCT GTTCTGGGTC GCACCGCTGC TCGGGGGGAC GTTGGGCGGG
ATGCTCTACC ACTGGATCAG CGCGGAGCCG TCGGCGCAGG TCACCGGCAT GGTGCCGCCC
GCCCCGGCGG AGTGA
 
Protein sequence
MDIRKCAAEA IGTFWLTFAG CGSAVVAAAF PQVGIGLLGV SLAFGLTVVT MAYAIGHISG 
CHLNPAVTCG LAAGGRFPAR EIPPYVVSQV IGGIAAAALL YAIASGAPDF DAAKGFAANG
YGDHSPGHYG LVSCLMAEVV LTMMFLFIIM GATHGKAPVS FAPLAIGFAL TLVHLVGIPV
TNLSVNPARS TGPALFAGGW AVGQLWLFWV APLLGGTLGG MLYHWISAEP SAQVTGMVPP
APAE